Transcription Factor

						

			
Accessions: T146182_1.02 (CISBP 1.02)

			
Names: ste11, T146182_1.02;
Organisms: Schizosaccharomyces pombe
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: family:Sox
Length: 468
Pfam Domains:     16-80 HMG (high mobility group) box
Sequence: 
(in bold interface residues)		   1 MSASLTAEQKDQKSSVKRPLNSFMLYRRDRQAEIPTSNHQSISRIIGQLWRNESAQVKKY   60
  61 YSDLSALERQKHMLENPEYKYTPKKRSTVRRRHKKVSPSSGSFVASDYVVLQQIAQSSKT  120
 121 LKQTEPEKPVNEEETLAALLAPALSYPKSGKSNLIETSELSCLSSSPMIRSHTIPSLSFT  180
 181 DQVSTTISTLDKSEQAPSSLGIYYRSPSSGSPIGRTKSVCLANKARIVPKRSMSSDGCVD  240
 241 KSYQMSKTPSLEANLPQNSSNCSARRVPKFDSKGTVSEQSNSDSPELSADKVLSHCSPID  300
 301 ARPSTPSCPNASISPKTPNTGDHYGFDGAEYLGTPLSVGSTTAYLYGQETELLSTPYCHT  360
 361 SYPAMSRLNSSSGYTCVSSSSVTNSGHTENNTWRSDEQSKGFVDINSFSQSLFSNGNYEF  420
 421 AAHSQELDDLFSQITDFTSTDPIASSLKDANSLGPSLLEPWLPNSNLF
Interface Residues: 18, 21, 23, 24, 27, 31, 38, 39, 40, 43, 81, 83, 85, 86, 88, 91, 96, 101, 102, 105, 174, 175
3D-footprint Homologues: 1o4x_B, 3u2b_C, 6jrp_D, 2gzk_A, 4s2q_D, 7m5w_A, 2lef_A, 4y60_C, 3f27_D, 1hry_A, 6dta_A
Binding Motifs: M2502_1.02 wwrTTTCTTTGTTywhww
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.