Transcription Factor
| Accessions: | T161767_1.02 (CISBP 1.02) |
| Names: | NCU04827, T161767_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 1353 |
| Pfam Domains: | 295-337 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 MDEKKPAPGADEVMTGISHPYPSPTVETTDAQFYHISAQRDGELEHQAVQSDGADQPDGL 60 61 PTVTDHHENHNLHELQELQDPVSPNQHSRPAPSLSNEDLQLAAQLTQDLAPVIAAAAASH 120 121 SQAQEEQLQVPVQVGVPVQTEDVDMQNDAGDPDLQEQLQVQLQNHNHELQSVMQSHAEQQ 180 181 QQQQQQQQQEQQQQDQNSQQQEQQEQQQQQQSPQQQQASQSSQQQPQQQQQQPQVPVQPH 240 241 PHYVQQLSQMQQTPGPTTAHLSTHIPIDHLAGTHPQYGAAVQDSTPPRKRSKVSRACDEC 300 301 RRKKIKCDAQSEVSDQPCSNCRRSSAPCLFSRVPQKRGPSKGYIKELADRINTIEGKLTG 360 361 AAVPDPLERRRTTPAEAFGSPIPGDDGRKRPYSSISSETFTPPAAHERLAGWGSEANRAP 420 421 EHRPIRPYHPTYPQIHSVNDLVPKPPAMSQSPDVNGGQVQVSEAAADVASQDGLASNGLS 480 481 QEPLEQAREISDVAFECYLNSVHRIFPILASRKDRVHSMLSQCPPVLQEAFYHALFAMLN 540 541 PMLPESAARENCNSLTSHGLLNEWDSQPRTVSSPVADLVCLQTLIMLIIEADYGGISAVK 600 601 GQRGGPKKLSLLGEAVGLGYIMKLHLAPPPDVNPNMDLDLDSEKNIALRAWWTLVALDRW 660 661 NAVGTAAPSMISSDVVVTPGLRNIMGDVVYNYTKISFLLTQFIPLFLTLSAPMPSDFAAL 720 721 TTKKPLVASLLNALMESFRWQFPADLITSPSSDPTLLLAYWHIRLLADLCSGGAKADFAL 780 781 QDCANIVGILTGNTELLTPLNHHFVSLVSLALLELEKLERTKDDAGRLLKDLLDFRVAAS 840 841 PWTSVVRDKIMSVSLINKERSSTAVVNGNHNNTGTSNQSQVQSHLQAVLQSQSLSQPLQQ 900 901 LADLATVAAGVEQSVNDANTENMVSSAAAVAAAAAAVAAAAAAHHQQQNVALSSVTNPAP 960 961 QVIPTSLDPEGNAGQARGEASADQDVDMDMEGAATDSNEERHTNGAEHTEPEQQQHFKTE 1020 1021 YRSDEEHEFKTEPQPETRPDDHHQSRQPQQQAEQEPQNVLSASPVDENSITGPGQTDTAS 1080 1081 TQEAAPEVPAREVLSSGTTDSQNANKDDITPNGTSASQASLTASLALSLGSGFGSLGLNT 1140 1141 AEIYEHYQRQQQELQLQKQAQQAVQQATQQSGSQSQVQPQAAQQNPSQEQQQQQQQQQHP 1200 1201 YHQRFEPKEATSQHHPQQPQQQVQQIQAQLQPQPQPQPAQPPSSSLPLSQAQAQAQLQQV 1260 1261 VAKQQQLVLQTLQQHQQQSQQQQQQQKLFSRPYEPEVFLKAGYLTCFGDDPVGSDGTSNG 1320 1321 NGSGSGSGSGNGNGSGATSGNGNVTGNGNGTSK |
| Interface Residues: | 290, 291, 292, 301, 303, 304, 305, 306, 323, 324, 335, 337, 338 |
| 3D-footprint Homologues: | 1f5e_P, 6o19_A, 1pyi_A, 2er8_C, 1hwt_C, 6gys_C, 1d66_B, 1zme_D, 7uik_T, 3coq_A |
| Binding Motifs: | M1739_1.02 wwdttCCGrk |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.