Transcription Factor
| Accessions: | Solyc07g040920.2.1 (EEADannot 2026-03-04) |
| Names: | 148312442 |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:MYBRELATED |
| Length: | 209 |
| Pfam Domains: | 5-56 Myb-like DNA-binding domain 8-61 Myb-like DNA-binding domain 121-179 linker histone H1 and H5 family |
| Sequence: (in bold interface residues) | 1 MGNPKQKWTSEEEEALRAGVAKHGAGKWKNIQRDPEFNHLLYSRSNIDLKDKWRNLNVSA 60 61 NGQGPRDKSRTPKAKANPDAAAAPLAITYAPLSSTLVPQDASADTVMEDSSKCALDGKTA 120 121 SKYNQMIYDALSSLNEPNGSDTSKLVNFIEQRHEVPQNFRRLLSSRLRRLVQQDKLEKVT 180 181 LSFLHLSAGLLINNCFCNFFCFQKASPNY |
| Interface Residues: | 5, 46, 47, 50, 51, 54, 55, 106, 107, 110, 111 |
| 3D-footprint Homologues: | 3osg_A, 1vfc_A, 1w0t_A, 7c4r_A, 2qhb_A, 5eyb_B |
| Binding Motifs: | EEAD0654 ACCCTAAACCC |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.