Transcription Factor
| Accessions: | T140844_1.02 (CISBP 1.02) |
| Names: | AT1G76580, T140844_1.02; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:SBP |
| Length: | 988 |
| Pfam Domains: | 82-158 SBP domain |
| Sequence: (in bold interface residues) | 1 MGELPKDDWQMNRWKWDGQRFEAIELQGESLQLSNKKGLDLNLPCGFNDVEGTPVDLTRP 60 61 SKKVRSGSPGSGGGGGGNYPKCQVDNCKEDLSIAKDYHRRHKVCEVHSKATKALVGKQMQ 120 121 RFCQQCSRFHLLSEFDEGKRSCRRRLDGHNRRRRKTQPDAITSQVVALENRDNTSNNTNM 180 181 DVMALLTALVCAQGRNEATTNGSPGVPQREQLLQILNKIKALPLPMNLTSKLNNIGILAR 240 241 KNPEQPSPMNPQNSMNGASSPSTMDLLAALSASLGSSAPEAIAFLSQGGFGNKESNDRTK 300 301 LTSSDHSATTSLEKKTLEFPSFGGGERTSSTNHSPSQYSDSRGQDTRSSLSLQLFTSSPE 360 361 EESRPKVASSTKYYSSASSNPVEDRSPSSSPVMQELFPLHTSPETRRYNNYKDTSTSPRT 420 421 SCLPLELFGASNRGATANPNYNVLRHQSGYASSGSDYSPPSLNSNAQERTGKISFKLFEK 480 481 DPSQLPNTLRTEIFRWLSSFPSDMESFIRPGCVILSVYVAMSASAWEQLEENLLQRVRSL 540 541 VQDSEFWSNSRFLVNAGRQLASHKHGRIRLSKSWRTLNLPELITVSPLAVVAGEETALIV 600 601 RGRNLTNDGMRLRCAHMGNYASMEVTGREHRLTKVDELNVSSFQVQSASSVSLGRCFIEL 660 661 ENGLRGDNFPLIIANATICKELNRLEEEFHPKDVIEEQIQNLDRPRSREEVLCFLNELGW 720 721 LFQRKWTSDIHGEPDFSLPRFKFLLVCSVERDYCSLIRTVLDMMVERNLGKDGLLNKESL 780 781 DMLADIQLLNRAIKRRNTKMAETLIHYSVNPSTRNFIFLPSIAGPGDITPLHLAASTSSS 840 841 DDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADKRNGQISL 900 901 NIENGIDQIGLSKRLSSELKRSCNTCASVALKYQRKVSGSRRLFPTPIIHSMLAVATVCV 960 961 CVCVFMHAFPMVRQGSHFSWGGLDYGSI |
| Interface Residues: | 750 |
| 3D-footprint Homologues: | 3iay_A |
| Binding Motifs: | M1564_1.02 ryygTAcrry |
| Related annotations: | PaperBLAST |
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