Transcription Factor

Accessions: 1mj2_A (3D-footprint 20231221), 1mj2_B (3D-footprint 20231221), 1mj2_C (3D-footprint 20231221), 1mj2_D (3D-footprint 20231221), 1mjm_A (3D-footprint 20231221), 1mjm_B (3D-footprint 20231221), 1mjo_A (3D-footprint 20231221), 1mjo_B (3D-footprint 20231221), 1mjo_C (3D-footprint 20231221), 1mjo_D (3D-footprint 20231221), 1mjp_A (3D-footprint 20231221), 1mjp_B (3D-footprint 20231221), 1mjq_A (3D-footprint 20231221), 1mjq_B (3D-footprint 20231221), 1mjq_C (3D-footprint 20231221), 1mjq_D (3D-footprint 20231221), 1mjq_G (3D-footprint 20231221), 1mjq_H (3D-footprint 20231221), 1mjq_I (3D-footprint 20231221), 1mjq_J (3D-footprint 20231221)
Names: Met regulon regulatory protein MetJ, Met repressor, METHIONINE REPRESSOR, METJ_ECOLI
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P0A8U6
Length: 104
Pfam Domains: 1-104 Met Apo-repressor, MetJ
Sequence:
(in bold interface residues)
1 AEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRRKVNNLRHATNSELLCEA 60
61 FLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPETWEY
Interface Residues: 2, 3, 7, 8, 23, 25, 42, 66
3D-footprint Homologues: 6crm_A, 1mjo_B, 6mrj_D, 1zgw_A
Binding Motifs: 1mj2_ABCD AGACGTCyAGAnGACy
1mj2_B mGnnkT
1mjm_AB rGACGTC
1mjm_B GAcnnCT
1mjo_ABCD rGACGTCaTGACGACT
1mjo_B GGmnGTy
1mjp_AB rGACsnC
1mjq_A AGnnAt
1mjq_ABCD AGTTATCTrGATAwCT
1mjq_GHIJ AGnTATCYwGAtAwCT
Binding Sites: 1mjp_C
1mjp_D
1mj2_F / 1mj2_G
1mjm_C / 1mjm_D
1mjo_F / 1mjo_G
1mjq_E / 1mjq_F / 1mjq_K / 1mjq_L
Publications: Garvie C.W, Phillips S.E. Direct and indirect readout in mutant Met repressor-operator complexes. Structure (London, England : 1993) 8:905-14 (2000). [Pubmed]
Related annotations: PaperBLAST

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