Transcription Factor

						

			
Accessions: XylR (DBTBS 1.0)

			
Names: D5MZA2_BACPN, XylR
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Uniprot: D5MZA2
Length: 384
Pfam Domains:     14-56 Winged helix-turn-helix DNA-binding
   84-267 ROK family
Sequence: 
(in bold interface residues)		   1 MDIADQTFVKKVNQKLLLKEILKNSPISRAKLSEMTGLNKSTVSSQVNTLMKENLVFEIG   60
  61 QGQSSGGRRPVMLVFNKKAGYSIGIDVGVDYISGILTDLEGTIILDQHHHLESNSPEITK  120
 121 DILIDMIHHFITRMPQSPYGLIGIGICVPGLIDKNQKIVFTPNSNWRDIDLKSFIQEKFN  180
 181 VPVFIENEANAGAYGEKVFGAAKNHNNIIYASISTGIGIGVIINNHLYRGVSGFSGEMGH  240
 241 MTIDFNGPKCSCGNRGCWELYASEKALLKSLQTKEKKVSYQDIIDLAHLNDIGTLNALQN  300
 301 FGFYLGIGLTNILNTFNPQAIILRNSIIESHPMVLNSIRSEVSSRVYPQLGNSYELLPSS  360
 361 LGKNAPALGMSSIVIEHFLDIVKM
Interface Residues: 6, 39, 40, 41, 42, 44, 45, 68
3D-footprint Homologues: 5f7q_C, 3e6c_C
Binding Motifs: XylR AAGTTAGTTTGTTTrAwCAACAAACTAAT
Binding Sites: xylA_3
xynP_3
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.