Transcription Factor

						

			
Accessions: T077093_1.02 (CISBP 1.02)

			
Names: e_gw1.38.2.1, T077093_1.02;
Organisms: Physcomitrella patens
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:E2F
Length: 400
Pfam Domains:    74-139 E2F/DP family winged-helix DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MKRRNECEEHHVEMNGWNGYTNSDLSPAPTPTGPRGRGSRAKTVKQTKNGPQTPGPSGIG   60
  61 SPTSSAPTPTSTCRYDSSLGLLTKKFIDLIKQADDGVLDLNKAADTLHVQKRRIYDITNV  120
 121 LEGIGLIEKKLKNRIRWKGLGMVRNAEAKDDAAGLLAEVEDLRIKEKKLDESISEMRERL  180
 181 RSLSEDEHNKQWLYVTEDDIKNLHCFQNETLIAIKAPLGTTLEVPDPDEAVEYPHRRFQI  240
 241 LLRSTLGPIDVYLVSRFEGRTEVPMETLPDSQEAGPSSSVDGMSHQENMVMVPEVGYGLS  300
 301 DLVPPVSHESASQAPEPTGSHPDFAGGIMRIAPAEVNTDTDYWLLSDAGVGISDMWRSDP  360
 361 SNAMWDEVVRLNPEFGSENIGSPRPHTPPSNNALEVDPVS
Interface Residues: 74, 110, 111, 112, 113, 115, 136
3D-footprint Homologues: 4yo2_A, 1cf7_A, 2qby_A, 1cf7_B
Binding Motifs: M0677_1.02 gsGCGCcaww
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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