Transcription Factor

Accessions: Q2M3X9 (JASPAR 2024)
Names: ZN674_HUMAN
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q2M3X9
Length: 581
Pfam Domains: 8-48 KRAB box
210-233 Zinc-finger double domain
223-246 C2H2-type zinc finger
224-246 C2H2-type zinc finger
224-246 Zinc finger, C2H2 type
238-262 Zinc-finger double domain
252-274 C2H2-type zinc finger
252-274 Zinc finger, C2H2 type
252-274 C2H2-type zinc finger
269-289 Zinc-finger double domain
279-302 C2H2-type zinc finger
280-302 C2H2-type zinc finger
280-302 Zinc finger, C2H2 type
295-319 Zinc-finger double domain
308-330 C2H2-type zinc finger
308-330 Zinc finger, C2H2 type
373-394 Zinc-finger double domain
384-395 C2H2-type zinc finger
385-407 C2H2-type zinc finger
385-407 Zinc finger, C2H2 type
399-423 Zinc-finger double domain
412-424 C2H2-type zinc finger
413-435 C2H2-type zinc finger
413-435 Zinc finger, C2H2 type
427-451 Zinc-finger double domain
440-463 C2H2-type zinc finger
441-463 C2H2-type zinc finger
441-463 Zinc finger, C2H2 type
458-479 Zinc-finger double domain
468-481 C2H2-type zinc finger
469-491 Zinc finger, C2H2 type
469-491 C2H2-type zinc finger
486-508 Zinc-finger double domain
496-517 C2H2-type zinc finger
497-519 C2H2-type zinc finger
497-519 Zinc finger, C2H2 type
512-535 Zinc-finger double domain
524-545 C2H2-type zinc finger
525-547 Zinc finger, C2H2 type
542-563 Zinc-finger double domain
552-575 C2H2-type zinc finger
553-575 C2H2-type zinc finger
553-575 Zinc finger, C2H2 type
Sequence:
(in bold interface residues)
1 MAMSQESLTFKDVFVDFTLEEWQQLDSAQKNLYRDVMLENYSHLVSVGHLVGKPDVIFRL 60
61 GPGDESWMADGGTPVRTCAGEDRPEVWEVDEQIDHYKESQDKFLWQAAFIGKETLKDESG 120
121 QECKICRKIIYLNTDFVSVKQRLPKYYSWERCSKHHLNFLGQNRSYVRKKDDGCKAYWKV 180
181 CLHYNLHKAQPAERFFDPNQRGKALHQKQALRKSQRSQTGEKLYKCTECGKVFIQKANLV 240
241 VHQRTHTGEKPYECCECAKAFSQKSTLIAHQRTHTGEKPYECSECGKTFIQKSTLIKHQR 300
301 THTGEKPFVCDKCPKAFKSSYHLIRHEKTHIRQAFYKGIKCTTSSLIYQRIHTSEKPQCS 360
361 EHGKASDEKPSPTKHWRTHTKENIYECSKCGKSFRGKSHLSVHQRIHTGEKPYECSICGK 420
421 TFSGKSHLSVHHRTHTGEKPYECRRCGKAFGEKSTLIVHQRMHTGEKPYKCNECGKAFSE 480
481 KSPLIKHQRIHTGERPYECTDCKKAFSRKSTLIKHQRIHTGEKPYKCSECGKAFSVKSTL 540
541 IVHHRTHTGEKPYECRDCGKAFSGKSTLIKHQRSHTGDKNL
Interface Residues: 225, 235, 236, 237, 238, 240, 241, 262, 263, 265, 266, 269, 290, 291, 292, 293, 294, 296, 297, 318, 319, 320, 321, 322, 325, 336, 368, 369, 370, 371, 374, 395, 396, 398, 399, 402, 413, 423, 424, 425, 426, 427, 428, 430, 434, 451, 452, 453, 454, 455, 457, 458, 461, 462, 479, 480, 481, 482, 483, 485, 486, 487, 488, 489, 492, 506, 508, 510, 511, 512, 513, 514, 515, 517, 518, 535, 536, 537, 538, 539, 540, 541, 542, 563, 564, 565, 566, 567, 569, 570
3D-footprint Homologues: 4wcg_A, 2drp_D, 1tf3_A, 7w1m_H, 4x9j_A, 1g2f_F, 2wbs_A, 5v3j_F, 8ssq_A, 8ssu_A, 8cuc_F, 7y3l_A, 8gn3_A, 7y3m_I, 2kmk_A, 3uk3_C, 7n5w_A, 6ml4_A, 1llm_D, 8h9h_G, 7ysf_A, 5yel_A, 5k5l_F, 1tf6_A, 6u9q_A, 5kkq_D, 5yj3_D, 7txc_E, 6e94_A, 1ubd_C, 6jnm_A, 2gli_A, 6blw_A, 5ei9_F, 5k5i_A, 4m9v_C, 6a57_A, 2jpa_A, 1f2i_J, 5kl3_A, 2lt7_A
Binding Motifs: UN0648.1 ggGGCAAyAAAaba
UN0648.2 ggGGCAAyAAAa
Binding Sites: UN0648.1.1
UN0648.1.10 / UN0648.1.17
UN0648.1.11 / UN0648.1.18
UN0648.1.12
UN0648.1.13
UN0648.1.14
UN0648.1.15
UN0648.1.16
UN0648.1.17
UN0648.1.18
UN0648.1.19
UN0648.1.2
UN0648.1.20
UN0648.1.3
UN0648.1.4
UN0648.1.5 / UN0648.1.6
UN0648.1.6 / UN0648.1.8
UN0648.1.10 / UN0648.1.7
UN0648.1.12 / UN0648.1.8
UN0648.1.16 / UN0648.1.9
UN0648.1.11
UN0648.1.13
UN0648.1.14
UN0648.1.15
UN0648.1.19
UN0648.1.20
UN0648.1.5
UN0648.1.7
UN0648.1.9
UN0648.2.1
UN0648.2.10
UN0648.2.11
UN0648.2.12
UN0648.2.13
UN0648.2.14
UN0648.2.15 / UN0648.2.20
UN0648.2.16
UN0648.2.17
UN0648.2.18 / UN0648.2.8
UN0648.2.19
UN0648.2.2
UN0648.2.3
UN0648.2.4
UN0648.2.5
UN0648.2.6
UN0648.2.7
UN0648.2.9
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.