Transcription Factor
| Accessions: | UP00575A (UniPROBE 20160601) |
| Names: | ARABIDOPSIS NAC DOMAIN PROTEIN 66, At3g61910, F21F14.80, NAC domain-containing protein 66, NAC SECONDARY WALL THICKENING PROMOTING FACTOR2, NAC transcription factor NST2, NAC066, NST2, Protein NAC SECONDARY WALL THICKENING PROMOTING FACTOR 2 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Description: | NAC transcription factor NST2: Transcription activator of genes involved in biosynthesis of secondary walls. Together with NST1, required for the secondary cell wall thickening of the anther endocethium, which is necessary for anther dehiscence. May also regulates the secondary cell wall lignification of other tissues such as tracheary elements |
| Length: | 184 |
| Pfam Domains: | 11-139 No apical meristem (NAM) protein |
| Sequence: (in bold interface residues) | 1 MNISVNGQSQVPPGFRFHPTEEELLKYYLRKKISNIKIDLDVIPDIDLNKLEPWDIQEMC 60 61 KIGTTPQNDWYFYSHKDKKYPTGTRTNRATTVGFWKATGRDKTIYTNGDRIGMRKTLVFY 120 121 KGRAPHGQKSDWIMHEYRLDESVLISSCGDHDVNVETCDVIGSDEGWVVCRVFKKNNLCK 180 181 NMIS |
| Interface Residues: | 80, 85, 87, 96, 98, 100, 120, 124, 125, 126, 129 |
| 3D-footprint Homologues: | 7xp3_B, 3swp_A |
| Binding Motifs: | UP00575A_1 waTTACGCAAyc UP00575A_2 swaCACGCaAycw |
| Binding Sites: | TTACGCAA TTACGTAA AAGCAATC ACAAGCAA ACACGCAA ACGCAACC ACGCAATC ATAACGTA ATACGCAA ATAGCGTA ATTGCGTA ATTGCGTG CACGCAAC GTAACGTA GTACGCAA GTAGCGTA GTTGCGTA TAACGTAA TACGCTAA TAGCGTAA |
| Publications: | Lindemose S, Jensen MK, Van de Velde J, O'Shea C, Heyndrickx KS, Workman CT, Vandepoele K, Skriver K, De Masi F. A DNA-binding-site landscape and regulatory network analysis for NAC transcription factors in Arabidopsis thaliana. Nucleic Acids Res 42:7681-93 (2014). [Pubmed] |
| Related annotations: | PaperBLAST |
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