Transcription Factor
| Accessions: | V5IL92 (JASPAR 2024) |
| Names: | V5IL92_NEUCR |
| Organisms: | Neurospora crassa |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | V5IL92 |
| Length: | 466 |
| Pfam Domains: | 414-447 GATA zinc finger |
| Sequence: (in bold interface residues) | 1 MEAGDSAARQSGIPTATTTREHFDPARPYNNRNSRGGTAMATATLINPSSQYHSHSFSHN 60 61 PYHPSSSASIPGMISPVDSRRTSDESENPHRQSLPSISEVISGTKPTSYPPHAPTSLPPT 120 121 QSLPSPFAPSGPPRSYDVDKHPSPRALHPSSGFPRPDPLPAFSDPARPQLSSRPPPPPPL 180 181 NTFPTHHQHPSPPVKLEQMEVDQRHAEASPLSAGYPHHPPGHPAGPHYAQTGRLPPGQLP 240 241 LSAYPVSPRHSGLGLPSPYDSQHRPPMYPEEQEYGHGYARSSEYKAAPERSLPDWSSYGE 300 301 MMYMIAHAGRTVYHFAEGYGAAAREQQGQPLPSRLPTESEISVVIDSAVVAVENLKNLRH 360 361 LIAQINSERSRENGGRKSGAEDDDVSMYGDGIGKHSSFNEVKKRRGRAAPPGRCHSCNRI 420 421 DTPEWRRGPDGARTLCNACGLHYAKLERKRQLEQRSIRPKPTDDRN |
| Interface Residues: | 423, 424, 426, 437, 441, 445 |
| 3D-footprint Homologues: | 1gat_A, 4hc9_A, 3dfx_B, 3vd6_C, 4gat_A |
| Binding Motifs: | UN0097.1 csCGATCGrtc UN0097.2 CGATCGrt |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.