Transcription Factor
| Accessions: | UP00269A (UniPROBE 20160601) |
| Names: | Protein RDR1, Rdr1, Repressor of drug resistance protein 1, YOR380W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q08904 |
| Description: | Transcriptional repressor involved in the control of multidrug resistance; negatively regulates expression of the PDR5 gene; member of the Gal4p family of zinc cluster proteins |
| Length: | 105 |
| Pfam Domains: | 17-49 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 ASPGSTALPHKRQRVRKACVPCRERKRKCNGKSPCEMCVAYGYVCHYIDGRVPSASPQVQ 60 61 QVGETSPDTESRPFVLPGIHRNEQPQPINTQNVTSQNIVDPTKSR |
| Interface Residues: | 12, 13, 23, 25, 26, 27, 28, 40, 41, 50, 52, 53 |
| 3D-footprint Homologues: | 1f5e_P, 1hwt_C, 6o19_A, 1zme_D, 7uik_T, 1d66_B, 3coq_A, 6gys_C |
| Binding Motifs: | UP00269A_1 tsvkmmstGCGGAwAtsrmks |
| Binding Sites: | ACCCGCGG AGCGGATA ATATCCGC ATCCGCAA ATCCGCAC ATCCGCGG ATCCGGAT ATTCCGCA CATCCGCA CCGCGGAA CGCGCGGA CGCGGATA CTTCCGCA GCGGATAC GTGCGGAA GTTCCGCA TATCCGCA TCCGCGGA TTCCGCAA CCCGCGGA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.