Transcription Factor

Accessions: 1g2f_F (3D-footprint 20231221)
Names: Early growth response protein 1, EGR-1, EGR1_MOUSE, Nerve growth factor-induced protein A, NGFI-A, TATA BOX ZINC FINGER PROTEIN, Transcription factor Zif268, Zinc finger protein Krox-24
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P08046
Length: 87
Pfam Domains: 4-28 C2H2-type zinc finger
4-28 Zinc finger, C2H2 type
20-44 Zinc-finger double domain
34-56 Zinc finger, C2H2 type
34-56 C2H2-type zinc finger
48-73 Zinc-finger double domain
62-84 Zinc finger, C2H2 type
62-80 C2H2-type zinc finger
Sequence:
(in bold interface residues)
1 ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 60
61 PFACDICGRKFATLHTRTRHTKIHLRQ
Interface Residues: 16, 17, 18, 19, 20, 22, 23, 44, 45, 46, 47, 48, 49, 50, 51, 52, 72, 73, 74, 75, 76, 77, 78, 79, 80, 83
3D-footprint Homologues: 1tf3_A, 6jnm_A, 6ml4_A, 7n5w_A, 3uk3_C, 2kmk_A, 8ssq_A, 7w1m_H, 5und_A, 2gli_A, 1g2f_F, 5k5l_F, 8ssu_A, 1tf6_A, 4x9j_A, 2i13_A, 6blw_A, 5kkq_D, 1ubd_C, 6u9q_A, 5yel_A, 5ei9_F, 2jpa_A, 1mey_C, 5kl3_A, 7ysf_A, 1f2i_J, 6wmi_A, 7eyi_G, 5v3j_F, 8h9h_G, 2lt7_A, 6e94_A, 6a57_A, 8cuc_F, 7y3l_A, 5k5i_A, 8gn3_A, 1llm_D, 2wbs_A, 7txc_E, 2drp_D, 4m9v_C, 7y3m_I, 5yj3_D
Binding Motifs: 1g2f_F cTTtTATaGCg
Binding Sites: 1g2f_D
1g2f_E
Publications: Wolfe S.A, Grant R.A, Elrod-Erickson M, Pabo C.O. Beyond the "recognition code": structures of two Cys2His2 zinc finger/TATA box complexes. Structure (London, England : 1993) 9:717-23 (2001). [Pubmed]
Related annotations: PaperBLAST

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