Transcription Factor
| Accessions: | T007882_1.02 (CISBP 1.02) |
| Names: | NCU03892, T007882_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:ARID/BRIGHT |
| Length: | 1060 |
| Pfam Domains: | 16-107 ARID/BRIGHT DNA binding domain |
| Sequence: (in bold interface residues) | 1 MAPPKPQPMPEHTVDRTPEYEKFIEDLRVFHEKRGTNFDPEPKMGNLTVDLLKLFKHIVE 60 61 HGGYDKVSDEKLMWRKMCEGLGLMRHNAPADAYTLKQIFYKNLAAYEIKTVHNKEPPPPE 120 121 ILEFTTAKGGSLLTRTLENFTARSLKGDKEDSGDDGTPSRERSTVDTPNSARASRGLREA 180 181 PAPRVIFHPDTNSTRQTRHAGSAQQQSAANPSSNSNPQNNQQPPSHSQSHSSTPIPSHGP 240 241 PHAHQNRGSASVMYNPGPDHSHHLVQSYQPAPLQPMQLRIVDTPTSNPELFNKRRRLLRQ 300 301 PGPPGAPGALSTSALVRAALPPGKSCRDRSLGPICSPDVGSLDGPNIYERCLLALRSGIR 360 361 AEQAFGLNHLVKISFERGDKYKFAQFSGLAEGLTEFALGVGSLFYNIEWVISNDPDVDDG 420 421 DIGELDGINGTSDILERIAELKRKDVQDNFQPSEFTDHMTLITEAVLTIRNMVMLPDNAW 480 481 FMADYPPIKDLLCILLHLPDMDLTVELKHFALDIAEQITPNLVLESDDPLYQTLLGQLKS 540 541 NDRGTILTALRAIGRISMNHATETNKLHNVPVSVLQNLMDWLLLNDDELVDACLDFLYQY 600 601 TAVVPNLDTLIKGTNAEHLVTHLVRLLSHGAKRHHKDIVVSEARIAYDAPSEQVVSIPPD 660 661 LLERLLAMEEPERTHQWVRCTFEEDPDAQVTQIAIWQAYNAAFLEPLKRTGRSMINAAEF 720 721 IRNISSVYHTAGAQVFREQGPTGEVQSRFIIRGIRPRAFPISPENRGYLGCQWTRQPTSD 780 781 EQQQQQQQQQVVCGAWHLTTESMWNHILTHHLGEAPGTDNKFSNKEGTYSCHWDSCRRYP 840 841 APTKLKLMQLMMHVKTHLKAEEARHNALYPTLQPSPTPAAGGATEPFPGGGTGGLTTPGG 900 901 GPVQVASSPKRSRTRVIKPAGTISLTFEETASVRDERNPNMPPQAAGIPLSAVLILRNIA 960 961 RNVVKTDAEERLRKQSRKRLRTAGEDDGGDDSEGKEEEEGASAWVSTSSSSYPGLAVSSD 1020 1021 AGWNERLFRPVMPRLWEVFCDNRLLAPYITSLFKLLEPVE |
| Interface Residues: | 88, 89, 93, 845, 847 |
| 3D-footprint Homologues: | 1kqq_A, 2gli_A |
| Binding Motifs: | M0113_1.02 hAAATTTd |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.