Transcription Factor

						

			
Accessions: T057760_1.02 (CISBP 1.02)

			
Names: CG31670, T057760_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 611
Pfam Domains:   318-337 Zinc finger, C2H2 type
  318-338 C2H2-type zinc finger
  332-356 Zinc-finger double domain
  346-368 Zinc finger, C2H2 type
  346-368 C2H2-type zinc finger
  363-384 Zinc-finger double domain
  374-396 Zinc finger, C2H2 type
  389-412 Zinc-finger double domain
  402-424 Zinc finger, C2H2 type
  402-424 C2H2-type zinc finger
  416-440 Zinc-finger double domain
  430-453 C2H2-type zinc finger
  430-452 Zinc finger, C2H2 type
  444-467 Zinc-finger double domain
  458-481 C2H2-type zinc finger
  458-481 Zinc finger, C2H2 type
Sequence: 
(in bold interface residues)		   1 MVYFSPRGMQPCSPAGEIAMMPPSKSPVMESAASEQNPAQQSQQQDEQSAKRACPLKFSI   60
  61 AKIMEPDHRPSQVPPPQPAPVSFATNDDDEDEDPEIDADSERSCSPIEVISLDQSPSTVN  120
 121 YDSAFKKYVPGPCSGATSSVASPPSTAAVQQFVSSRHQELLSQYPLLYYAPNQLMCAAAA  180
 181 AQYAALTAQQQSLASAAHLSSFTASLNASLHHSQSLRRNLGHPLAAAAAVAAVAQSQAVP  240
 241 NLQHTLEKSPVAQRTAQSSGLQANLKRKRSPQDQGEVTPPPASTATSATGARSRSPSPQG  300
 301 SIEDSSPGSASGGKPKTFSCLECGKVFNAHYNLTRHMPVHTGARPFVCKVCGKGFRQAST  360
 361 LCRHKIIHTSEKPHKCQTCGKAFNRSSTLNTHSRIHAGYKPFVCEYCGKGFHQKGNYKNH  420
 421 KLTHSGEKAYKCNICNKAFHQVYNLTFHMHTHNDKKPYTCRVCAKGFCRNFDLKKHMRKL  480
 481 HEIGGDLDDLDMPPTYDRRREYTRREPLASGYGQASGQLTPDSSSGSMSPPINVTTPPLS  540
 541 SGETSNPAWPRSAVSQYPPGGFHHQLGVAPPHDYPSGSAFLQLQPQQPHPQSQQHHQQQQ  600
 601 RLSETFIAKVF
Interface Residues: 318, 328, 329, 330, 331, 332, 334, 335, 356, 357, 358, 359, 360, 362, 363, 364, 365, 366, 369, 384, 385, 386, 387, 388, 389, 391, 392, 394, 395, 412, 413, 414, 415, 416, 418, 419, 441, 442, 443, 444, 446, 447, 469, 471, 472, 473, 475
3D-footprint Homologues: 2kmk_A, 1tf3_A, 8gn3_A, 1tf6_A, 5ei9_F, 5v3j_F, 7w1m_H, 5k5i_A, 8ssu_A, 2lt7_A, 8ssq_A, 1ubd_C, 6jnm_A, 5kkq_D, 4x9j_A, 2gli_A, 1f2i_J, 5kl3_A, 2wbs_A, 6ml4_A, 6blw_A, 4m9v_C, 6e94_A, 7ysf_A, 6a57_A, 5yel_A, 2jpa_A, 7y3l_A, 8cuc_F, 7txc_E, 1g2f_F, 1llm_D, 7y3m_I, 7n5w_A, 3uk3_C, 5yj3_D, 6u9q_A, 8h9h_G, 2drp_D
Binding Motifs: M4840_1.02 AAAwGmgCAwC
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.