Transcription Factor
| Accessions: | UP00339A (UniPROBE 20160601) |
| Names: | "Protein MGA1, Mga1, YGR249W" |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P53050 |
| Description: | Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defects of ammonium permease mutants |
| Length: | 224 |
| Pfam Domains: | 5-118 HSF-type DNA-binding |
| Sequence: (in bold interface residues) | 1 MQPKTFVHQLHAILLEPEVNKWIYWSPTDNTVFFLKPYDPNFSTHVLKRYFKHGNVNSFV 60 61 RQLHMYGFHKLSHPSPDQSSANNGNVKELVEWKFTHPSGFFFKEANAGILNKIQRKSTGV 120 121 GKDGKRKNILSPISVSYVDASRLNVLSQQSGPVSAREPSNMFMGSPVHYSTSQSPPHISI 180 181 PQQQQSSGPYLISSLPPQQPTVNMMRRQSISARMMNSYDYPNQF |
| Interface Residues: | 52, 53, 58, 60, 61, 62, 64, 65, 115 |
| 3D-footprint Homologues: | 5hdn_C, 5d5v_B, 5d5w_B, 3hts_B, 7dci_A |
| Binding Motifs: | UP00339A_1 wrsrhtAtAGAACAythhwwm |
| Binding Sites: | AAAGAACA ACAGAACA ACCGAACA AGAAGGAA AGAGAACA ATAGAACA ATAGAACG ATAGAATA ATAGAATG ATCGAACA ATGGAACA ATTCTATA ATTCTATG CATAGAAC GCAGAACA GTTCTATA TTATAGAA AGAGAAGG ATAGAAAC GATAGAAC |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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