Transcription Factor

						

			
Accessions: T098475_1.02 (CISBP 1.02)

			
Names: Dll, T098475_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Homeodomain
Length: 347
Pfam Domains:   125-181 Homeobox domain
Sequence: 
(in bold interface residues)		   1 MDAPDAPHTPKYMDGGNTAASVTPGINIPGKSAFVELQQHAAAGYGGIRSTYQHFGPQGG   60
  61 QDSGFPSPRSALGYPFPPMHQNSYSGYHLGSYAPPCASPPKDDFSISDKCEDSGLRVNGK  120
 121 GKKMRKPRTIYSSLQLQQLNRRFQRTQYLALPERAELAASLGLTQTQVKIWFQNRRSKYK  180
 181 KMMKAAQGPGTNSGMPLGGGGPNPGQHSPNQMHSGELANGRFLWAALETNGTLALVHSTG  240
 241 GNNGGGSNSGSPSHYLPPGHSPTPSSTPVSELSPEFPPTGLSPPTQAPWDQKPHWIDHKP  300
 301 PPQMTPQPPHPAATLHPQTHHHNPPPQMGGYVPQYWYQPETNPSLVT
Interface Residues: 125, 126, 127, 128, 166, 167, 169, 170, 173, 174, 176, 177, 178, 181
3D-footprint Homologues: 3cmy_A, 8pmf_A, 5zfz_A, 1puf_A, 3d1n_M, 5zjt_E, 8ejp_B, 1fjl_B, 6a8r_A, 1ig7_A, 6m3d_C, 1nk2_P, 1zq3_P, 2lkx_A, 2ld5_A, 7q3o_C, 6es3_K, 2hdd_A, 4cyc_A, 2r5y_A, 1jgg_B, 5flv_I, 2hos_A, 9b8u_A, 1puf_B, 8ik5_C, 7psx_B, 5hod_A, 3lnq_A, 3a01_E, 8osb_E, 1b72_A, 5jlw_D, 3rkq_B, 8eml_B, 4xrs_G, 7xrc_C, 1e3o_C, 2xsd_C, 1au7_A, 1le8_A, 1le8_B, 1du0_A, 8g87_X, 1mnm_C, 8bx1_A, 4qtr_D, 1k61_B, 4xrm_B, 1o4x_A
Binding Motifs: M1088_1.02 gcTAATTAmt
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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