Transcription Factor

						

			
Accessions: T127986_1.02 (CISBP 1.02)

			
Names: NTL9, T127986_1.02;
Organisms: Arabidopsis thaliana
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:NAC/NAM
Length: 534
Pfam Domains:     9-135 No apical meristem (NAM) protein
Sequence: 
(in bold interface residues)		   1 MGAVSMESLPLGFRFRPTDEELVNHYLRLKINGRHSDVRVIPDIDVCKWEPWDLPALSVI   60
  61 KTDDPEWFFFCPRDRKYPNGHRSNRATDSGYWKATGKDRSIKSKKTLIGMKKTLVFYRGR  120
 121 APKGERTNWIMHEYRPTLKDLDGTSPGQSPYVLCRLFHKPDDRVNGVKSDEAAFTASNKY  180
 181 SPDDTSSDLVQETPSSDAAVEKPSDYSGGCGYAHSNSTADGTMIEAPEENLWLSCDLEDQ  240
 241 KAPLPCMDSIYAGDFSYDEIGFQFQDGTSEPDVSLTELLEEVFNNPDDFSCEESISRENP  300
 301 AVSPNGIFSSAKMLQSAAPEDAFFNDFMAFTDTDAEMAQLQYGSEGGASGWPSDTNSYYS  360
 361 DLVQQEQMINHNTENNLTEGRGIKIRARQPQNRQSTGLINQGIAPRRIRLQLQSNSEVKE  420
 421 REEVNEGHTVIPEAKEAAAKYSEKSGSLVKPQIKLRARGTIGQVKGERFADDEKFVVVTG  480
 481 TGAEQKETRREAMEGGCNGNGGCDGWGRDGYMEDTGEFMTHETQRERERESNVV
Interface Residues: 77, 82, 84, 93, 95, 97, 117, 121, 122, 123, 126
3D-footprint Homologues: 7xp3_B, 3swp_A
Binding Motifs: M1403_1.02 TTAAGTAAT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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