Transcription Factor

						

			
Accessions: T18903 (AthalianaCistrome v4_May2016)

			
Names: AT4G16150, CAMTA5, T18903;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:CAMTA
Length: 923
Pfam Domains:    28-146 CG-1 domain
  564-640 Ankyrin repeats (3 copies)
  612-639 Ankyrin repeat
  612-643 Ankyrin repeats (many copies)
  612-643 Ankyrin repeat
  800-820 IQ calmodulin-binding motif
  876-896 IQ calmodulin-binding motif
Sequence: 
(in bold interface residues)		   1 MAGVDSGKLIGSEIHGFHTLQDLDIQTMLDEAYSRWLRPNEIHALLCNHKFFTINVKPVN   60
  61 LPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTIKEAHEHLKVGNEERIHVYYAHGEDTP  120
 121 TFVRRCYWLLDKSQEHIVLVHYRETHEVHAAPATPGNSYSSSITDHLSPKIVAEDTSSGV  180
 181 HNTCNTGFEVRSNSLGSRNHEIRLHEINTLDWDELLVPADISNQSHPTEEDMLYFTEQLQ  240
 241 TAPRGSVKQGNHLAGYNGSVDIPSFPGLEDPVYQNNNSCGAGEFSSQHSHCGVDPNLQRR  300
 301 DFSATVTDQPGDALLNNGYGSQDSFGRWVNNFISDSPGSVDDPSLEAVYTPGQDSSTPPT  360
 361 VFHSHSDIPEQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPA  420
 421 EFLQMGVYRCFLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWE  480
 481 EFEFQVRLAHLLFTSSNKISVLTSKISPENLLEAKKLASRTSHLLNSWAYLMKSIQANEV  540
 541 PFDQARDHLFELTLKNRLKEWLLEKVIENRNTKEYDSKGLGVIHLCAVLGYTWSILLFSW  600
 601 ANISLDFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADLAQQ  660
 661 KGYDGLAAFLAEKCLVAQFKDMQTAGNISGNLETIKAEKSSNPGNANEEEQSLKDTLAAY  720
 721 RTAAEAAARIQGAFREHELKVRSSAVRFASKEEEAKNIIAAMKIQHAFRNFEVRRKIAAA  780
 781 ARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEKAILRWRLKR  840
 841 KGFRGLQVSQPDEKEGSEAVEDFYKTSQKQAEERLERSVVKVQAMFRSKKAQQDYRRMKL  900
 901 AHEEAQLEYDGMQELDQMATEES
Interface Residues: 578, 589
3D-footprint Homologues: 8ipp_B
Binding Motifs: M0351 mcGyGTrwraavCGyGTk
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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