Transcription Factor
| Accessions: | UP00020A (UniPROBE 20160601) |
| Names: | activating transcription factor 1, Atf1, Cyclic AMP-dependent transcription factor ATF-1, TCR-ATF1 |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | P81269 |
| Description: | activating transcription factor 1: Mus musculus activating transcription factor 1 (Atf1), mRNA |
| Length: | 76 |
| Pfam Domains: | 17-72 bZIP transcription factor 20-68 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 MTSPVTLTSQTTKTDDPQLRREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTL 60 61 IEELKTLKDLYSHKSV |
| Interface Residues: | 24, 28, 29, 31, 32, 35, 36 |
| 3D-footprint Homologues: | 4eot_A, 2wt7_B, 7x5e_F, 5t01_B, 1dh3_C, 5vpe_D |
| Binding Motifs: | UP00020A_1 ackrTGACGTCAycra UP00020A_2 gdaTGACGaryAwm |
| Binding Sites: | CTACGTCA TGACGTAA AACGTCAT AATGACGT ACGTCACA ACGTCACC ACGTCACG ACGTCACT ACGTCATA ACGTCATC ACGTCATG ATGACGTA ATGACGTC ATGACGTG ATTACGTA CACGTCAC CGTCATAA CGTCATCA GTGACGTA TCACGTCA |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.