Transcription Factor
| Accessions: | MD17G1279200 (EEADannot 2025-01-07) |
| Names: | MdMYB2 |
| Organisms: | Malus domestica |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Tryptophan cluster factors MYB |
| Length: | 290 |
| Pfam Domains: | 35-82 Myb-like DNA-binding domain 38-95 Myb-like DNA-binding domain 88-131 Myb-like DNA-binding domain 92-138 Myb-like DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MDINNVHDQMRSARYGSLAAAATHDQPIEGLDLRKGPWTAEEDSILNDYVNIHGEGRWNS 60 61 LACHAGLKRTGKSCRLRWLNYLRPNVQRGNITLQEQLIILQLHSRWGNRWSKIAEYLPGR 120 121 TDNEIKNYWRTRVQKQAKQLKCDVNSKQFQDAMRYVWIPRLIERIGSLPEAVPEQPSTCI 180 181 TTTSESECQYLVDPNFVPETSCSTSSESYDQVQVCSIPADPTSSGDEFMTYPSSGQYGSE 240 241 NGSGCSQNGINSDIDGFEQSNYWSTGGDTSVENLWTEENIWFLQQQLSDD |
| Interface Residues: | 35, 70, 71, 72, 73, 75, 76, 80, 81, 123, 126, 127, 130, 131 |
| 3D-footprint Homologues: | 1vfc_A, 1w0t_A, 2kdz_A, 7xur_A, 7c4r_A |
| Binding Motifs: | EEAD0087 CAACTG |
| Binding Sites: | MBS_1 |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.