Transcription Factor
| Accessions: | T090505_1.02 (CISBP 1.02) |
| Names: | ANIA_01217, T090505_1.02; |
| Organisms: | Emericella nidulans |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 566 |
| Pfam Domains: | 43-96 Homeobox domain 61-92 Homeobox KN domain |
| Sequence: (in bold interface residues) | 1 MVHPTMMHHPMDGYYYAQPPFDMVDYYHQPMMDYEEYAENLSRPRLTKEQVETLEAQFQA 60 61 HPKPSSNVKRQLAQQTHLSLPRVANWFQNRRAKAKQQKRQEEYERMQKAKAEAEEAAKRK 120 121 SESSVPESSDSQRSAEAKDEKKQDDSKAPTPKPSKPASDDQKQSEAPAESNHQQTRSESN 180 181 RVASLASLQRAMDAAAQYQGGQGTTSMGGSGSVSPTTSLPNDADSAVWSSVNSTNGELSV 240 241 PGLENSQSFSDYRSASDAGASYNSMQFALQADAANARRGSSDVLADSFDGIGISASPSLS 300 301 QLGNRTDRPAWKETGKELDLAARRNRPRPAASWHVEVHFNALYFDHVANDTGPELRHCEA 360 361 IQICPEPRFALRRAPPTPLTPEDLHHLLPTTPSTDGYCLSAQPTAHLFPTTQPMQINIAS 420 421 PPATPLGMDIMSSYPYHSVAPPMSAPANFTSFPDYSCDGSFQGRNWEATSMPSPEVPFQS 480 481 QCHQMNFSSIPYDHALDQSQSENGPSQSPFGDADIQAPGDASKATEFHLYEFPDQEEAHR 540 541 FVAQQLPNQKPKAYTFADNRTPTNFG |
| Interface Residues: | 41, 43, 45, 81, 82, 84, 85, 88, 89, 92, 93, 95, 96, 106, 109 |
| 3D-footprint Homologues: | 2lkx_A, 1b72_A, 3lnq_A, 6a8r_A, 3cmy_A, 2hdd_A, 5jlw_D, 3rkq_B, 2r5y_A, 1puf_B, 1jgg_B, 3d1n_M, 2hos_A, 1nk2_P, 4cyc_A, 1au7_A, 5flv_I, 1fjl_B, 5zjt_E, 3a01_E, 2h1k_B, 5hod_A, 1mnm_C, 2d5v_B, 1k61_B, 1le8_B, 2ld5_A, 7xrc_C, 1ig7_A, 1e3o_C, 2xsd_C, 7q3o_C, 1puf_A, 4xrm_B, 1du0_A, 8g87_X, 6es3_K, 4xrs_G, 7psx_B, 5zfz_A, 6fqp_B, 3l1p_A, 1o4x_A, 4qtr_D, 6fqq_E, 6m3d_C |
| Binding Motifs: | M0865_1.02 wwycaATAww |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.