Transcription Factor

Accessions: Q8LC30 (JASPAR 2024)
Names: Ethylene-responsive transcription factor RAP2-1, Protein RELATED TO APETALA2 1, RAP21_ARATH
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q8LC30
Length:
Binding Motifs: MA1216.1 dtGkCGGYGghgr
MA1679.1 cdyCACCGACAhtdh
MA1679.2 CACCGACA
Binding Sites: MA1679.2.1 / MA1679.2.12 / MA1679.2.13 / MA1679.2.14 / MA1679.2.15 / MA1679.2.16 / MA1679.2.17 / MA1679.2.4
MA1216.1.1
MA1216.1.10
MA1216.1.11
MA1216.1.12
MA1216.1.13
MA1216.1.14
MA1216.1.15
MA1216.1.16
MA1216.1.17
MA1216.1.18
MA1216.1.19
MA1216.1.2
MA1216.1.20
MA1216.1.3
MA1216.1.4
MA1216.1.5
MA1216.1.6
MA1216.1.7
MA1216.1.8
MA1216.1.9
MA1679.1.2
MA1679.1.3
MA1679.1.1
MA1679.1.10 / MA1679.1.6
MA1679.1.11 / MA1679.1.7
MA1679.1.12 / MA1679.1.8
MA1679.1.13
MA1679.1.14
MA1679.1.15 / MA1679.1.9
MA1679.1.10 / MA1679.1.16
MA1679.1.11 / MA1679.1.17
MA1679.1.12 / MA1679.1.18
MA1679.1.13 / MA1679.1.19
MA1679.1.14 / MA1679.1.20
MA1679.1.3 / MA1679.1.4
MA1679.1.4 / MA1679.1.5
MA1679.1.5 / MA1679.1.6
MA1679.1.7
MA1679.1.8
MA1679.1.9
MA1679.1.15
MA1679.1.16
MA1679.1.17
MA1679.1.18
MA1679.1.19
MA1679.1.20
MA1679.2.2 / MA1679.2.3
MA1679.2.5
MA1679.2.6 / MA1679.2.7 / MA1679.2.9
MA1679.2.8
MA1679.2.10
MA1679.2.11 / MA1679.2.18 / MA1679.2.19 / MA1679.2.20
Publications: Hao D., Ohme-Takagi M., Sarai A. Unique mode of GCC box recognition by the DNA-binding domain of ethylene-responsive element-binding factor (ERF domain) in plant. J. Biol. Chem. 273:26857-26861 (1998). [Pubmed]

Dong CJ, Liu JY. The Arabidopsis EAR-motif-containing protein RAP2. 1 functions as an active transcriptional repressor to keep stress responses under tight control : (BMC). [Pubmed]
Related annotations: PaperBLAST

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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.