Transcription Factor
| Accessions: | Solyc05g007180.3.1 (EEADannot 2026-03-04) |
| Names: | HB13 |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2026-03-04 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:Homeo domain factors HD-ZIP |
| Length: | 312 |
| Pfam Domains: | 86-139 Homeobox domain 141-184 Homeobox associated leucine zipper |
| Sequence: (in bold interface residues) | 1 MTCTNYEMAFFPTNFMLQTPHNEDEHQPSTSLNPILPSCSPQDFHGIASFLGKRSMSFSG 60 61 MDGNNGCEENHGEDDLSDDGSQAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARAL 120 121 GLQPRQIAIWFQNRRARWKTKQLEKDYELLKRQFDAIKAENDALQTQNQKLHAEIMSLKN 180 181 REQPTESINLNKETEGSCSNRSENSSEIKLDISRTPAIDSPLSNHHPNISSRPFFPPSMI 240 241 RSNNNNNNNGVVVPHQLFHINSSSSRQDLKLMDQNTTTNNSSSVKEESLSNMFCGIDDQT 300 301 SFWPWLEQQHFN |
| Interface Residues: | 84, 86, 87, 88, 89, 125, 126, 128, 129, 132, 133, 135, 136, 137, 139, 140 |
| 3D-footprint Homologues: | 8ejp_B, 3cmy_A, 6a8r_A, 1nk2_P, 1b72_A, 1puf_B, 2ld5_A, 5hod_A, 1au7_A, 3rkq_B, 5jlw_D, 8ik5_C, 1ig7_A, 7q3o_C, 8osb_E, 1le8_A, 1zq3_P, 1fjl_B, 8eml_B, 4qtr_D, 2lkx_A, 9b8u_A, 7psx_B, 3lnq_A, 2hdd_A, 6es3_K, 4xrs_G, 2r5y_A, 1puf_A, 5zfz_A, 1jgg_B, 5flv_I, 3a01_E, 1du0_A, 5zjt_E, 4cyc_A, 8pmf_A, 6wig_A, 2hos_A, 6m3d_C |
| Binding Motifs: | EEAD0650 wyAATTATTrw |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.