Transcription Factor
| Accessions: | JUND (HT-SELEX2 May2017) |
| Names: | ENSG00000130522, JUND |
| Organisms: | Homo sapiens |
| Libraries: | HT-SELEX2 May2017 1 1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed] |
| Notes: | TF family: bZIP experiment: HT-SELEX Hamming distance: 1 cycle: 4, TF family: bZIP experiment: Methyl-HT-SELEX Hamming distance: 1 cycle: 4 |
| Length: | 140 |
| Pfam Domains: | 2-50 Jun-like transcription factor 58-121 bZIP Maf transcription factor 59-121 bZIP transcription factor 64-119 Basic region leucine zipper |
| Sequence: (in bold interface residues) | 1 GGAATVAFAAEPVPFPPPPPPGALGPPRLAALKDEPQTVPDVPSFGESPPLSPIDMDTQE 60 61 RIKAERKRLRNRIAASKCRKRKLERISRLEEKVKTLKSQNTELASTASLLREQVAQLKQK 120 121 VLSHVNSGCQLLPQHQVPAY |
| Interface Residues: | 67, 70, 71, 72, 74, 75, 78, 79, 82 |
| 3D-footprint Homologues: | 2wt7_A, 1gd2_G, 2wt7_B, 7x5e_F, 1skn_P, 2dgc_A, 5vpe_C, 1dh3_C, 5vpe_D, 5t01_B |
| Binding Motifs: | JUND_3 srTGACGTCAts JUND_4 srTGACGCAys JUND_methyl_1 gATGAsTCATs JUND_methyl_2 saTGACtCATs |
| Related annotations: | PaperBLAST |
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