Transcription Factor
| Accessions: | UP00329A (UniPROBE 20160601) |
| Names: | Aro80, D9461.10, Transcriptional activator ARO80, YDR421W |
| Organisms: | Saccharomyces cerevisiae |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Uniprot: | Q04052 |
| Description: | Zinc finger transcriptional activator of the Zn2Cys6 family; activates transcription of aromatic amino acid catabolic genes in the presence of aromatic amino acids |
| Length: | 116 |
| Pfam Domains: | 22-63 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 SAKKRPSGNAAFELPKRRRTYQACISCRSRKVKCDLGPVDNPHDPPCARCKRELKKCIFS 60 61 SNKGTSNDLPPNSINAISLPSLGKSKQEIQNDSTSPILSDVPLSRKGISSEKSFKS |
| Interface Residues: | 17, 18, 28, 30, 31, 32, 33, 52, 53 |
| 3D-footprint Homologues: | 1f5e_P, 1pyi_A, 7uik_T, 1zme_D, 1d66_B, 3coq_A, 6gys_C |
| Binding Motifs: | UP00329A_1 grkmawkCTCGGbwAkwawkh |
| Binding Sites: | ATGCCGAA ATTACCGA ATTCCCGA ATTGCCGA CCTCGGCA CTCGGCAA CTCGGGAA CTCGGTAA GCTCGGCA GCTCGGTA GTTGCCGA TCTCGGCA TTACCGAA TTCCCGAA TTCGGCAA ATGCCGAG ATTCGGCA CTTACCGA GTTCGGCA GTTCGGTA |
| Publications: | *Zhu C, *Byers K, *McCord RP, Shi Z, Berger MF, Newburger D, Saulrieta K, Smith Z, Shah M, Radhakrishnan M, Philippakis AA, Hu Y, De Masi F, Pacek M, Rolfs A , Murthy TVS, LaBaer J, Bulyk ML. High-Resolution DNA Binding Specificity Analysis of Yeast Transcription Factors. Genome Research. Epub January 21, 2009, doi:10.1101/gr.090233.108 (*co-1st authors). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.