Transcription Factor

Accessions: 6j9c_D (3D-footprint 20231221)
Names: B3 domain-containing transcription factor LEC2, LEC2_ARATH, Protein LEAFY COTYLEDON 2
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: Q1PFR7
Length: 112
Pfam Domains: 13-108 B3 DNA binding domain
Sequence:
(in bold interface residues)
1 STFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVFSMQSW 60
61 SFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYEDESKNLYFAMNGN
Interface Residues: 17, 19, 24, 25, 26, 28, 67, 69, 70, 71, 72, 73, 74
3D-footprint Homologues: 6j9b_A, 6j9c_D, 6sdg_B, 6fas_B, 7et6_A
Binding Motifs: 6j9c_D tGCATG
Binding Sites: 6j9c_E
6j9c_F
Publications: Tao Z, Hu H, Luo X, Jia B, Du J, He Y. Embryonic resetting of the parental vernalized state by two B3 domain transcription factors in Arabidopsis. Nat Plants 5:424-435 (2019). [Pubmed]
Related annotations: PaperBLAST

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