Transcription Factor

						

			
Accessions: T057676_1.02 (CISBP 1.02)

			
Names: sens, T057676_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:C2H2 ZF
Length: 541
Pfam Domains:   413-435 C2H2-type zinc finger
  413-435 Zinc finger, C2H2 type
  413-431 C2H2-type zinc finger
  428-451 Zinc-finger double domain
  441-459 C2H2-type zinc finger
  441-463 Zinc finger, C2H2 type
  456-479 Zinc-finger double domain
  468-491 C2H2-type zinc finger
  469-491 C2H2-type zinc finger
  469-491 Zinc finger, C2H2 type
  483-506 Zinc-finger double domain
  497-519 C2H2-type zinc finger
  498-520 Zinc finger, C2H2 type
  499-520 C2H2-type zinc finger
Sequence: 
(in bold interface residues)		   1 MNHLSPPPSPHSQQPSPAGLGCHGAALDKQWMQRASAFNTVIASAAAQKLNGRDLPFLYN   60
  61 PLLYSSALLWPQFLLSSATALGTPLTPMTPKSPASVVLGQRDRDFALTPEKEHELQMNNN  120
 121 NENSKQDYQEQDEDMPLNLSTKERITSDDSNRDQYHSSSNNSSRSSSSSEVEQLHPMTSL  180
 181 NVTPPPLSAVNLKSSSTPQQQRQRSQGNIIWSPASMCERSARREQYGLKMEEQGDEEEHQ  240
 241 VDPIVRKFKYERRTASISSLQSPISSLSAPASNAVQDLEFEVAQQQLYAHRSAFMAGLTG  300
 301 NNLELLTQHLKLKSEQPQQQQQQHRIKDEQQQDNRSAAALMNLVAAAEFGYMRNQHQQPQ  360
 361 QQQQQQLHHQQQPQQHQHQQQHPDSTATDVARRSSSSSSYQGENEEKRSGRNFQCKQCGK  420
 421 SFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTYIHTGEKPHKCTVCLKAFSQ  480
 481 SSNLITHMRKHTGYKPFGCHLCDQSFQRKVDLRRHRESRHEEAPPVEDLKPLKMEVSSSS  540
 541 C
Interface Residues: 413, 424, 425, 426, 427, 429, 430, 432, 433, 434, 436, 451, 452, 453, 454, 455, 458, 459, 479, 480, 481, 482, 483, 484, 485, 486, 487, 490, 507, 508, 509, 510, 511, 512, 513, 514, 518
3D-footprint Homologues: 2kmk_A, 5v3j_F, 2drp_D, 8ssq_A, 7w1m_H, 5yel_A, 8ssu_A, 5kkq_D, 1tf6_A, 8gn3_A, 5ei9_F, 5k5i_A, 2lt7_A, 6e94_A, 7ysf_A, 2jpa_A, 1ubd_C, 1tf3_A, 7y3l_A, 7n5w_A, 6jnm_A, 3uk3_C, 6ml4_A, 6blw_A, 5k5l_F, 6u9q_A, 4x9j_A, 2gli_A, 1f2i_J, 2wbs_A, 1g2f_F, 5kl3_A, 7txc_E, 4m9v_C, 8h9h_G, 6a57_A, 8cuc_F, 1llm_D, 7y3m_I, 5yj3_D
Binding Motifs: M5187_1.02 GCyGTGATTT
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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