Transcription Factor
| Accessions: | Q9UGU5 (JASPAR 2024) |
| Names: | High mobility group protein 2-like 1, HMG box-containing protein 4, HMG domain-containing protein 4, HMGX4_HUMAN, Protein HMGBCG |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | Q9UGU5 |
| Length: | 601 |
| Pfam Domains: | 107-233 Domain of unknown function (DUF4171) 406-468 Domain of unknown function (DUF1898) 408-470 HMG (high mobility group) box |
| Sequence: (in bold interface residues) | 1 MAYDDSVKKEDCFDGDHTFEDIGLAAGRSQREKKRSYKDFLREEEEIAAQVRNSSKKKLK 60 61 DSELYFLGTDTHKKKRKHSSDDYYYGDISSLESSQKKKKKSSPQSTDTAMDLLKAITSPL 120 121 AAGSKPSKKTGEKSSGSSSHSESKKEHHRKKVSGSSGELPLEDGGSHKSKKMKPLYVNTE 180 181 TLTLREPDGLKMKLILSPKEKGSSSVDEESFQYPSQQATVKKSSKKSARDEQGALLLGHE 240 241 LQSFLKTARKKHKSSSDAHSSPGPEGCGSDASQFAESHSANLDLSGLEPILVESDSSSGG 300 301 ELEAGELVIDDSYREIKKKKKSKKSKKKKDKEKHKEKRHSKSKRSLGLSAVPVGEVTVTS 360 361 GPPPSIPYAGAAAPPLPLPGLHTDGHSEKKKKKEEKDKERERGEKPKKKNMSAYQVFCKE 420 421 YRVTIVADHPGIDFGELSKKLAEVWKQLPEKDKLIWKQKAQYLQHKQNKAEATTVKRKAS 480 481 SSEGSMKVKASSVGVLSPQKKSPPTTMLLPASPAKAPETEPIDVAAHLQLLGESLSLIGH 540 541 RLQETEGMVAVSGSLSVLLDSIICALGPLACLTTQLPELNGCPKQVLSNTLDNIAYIMPG 600 601 L |
| Interface Residues: | 391, 393, 395, 398, 408, 409, 412, 414, 415, 418, 422, 433, 434, 435, 438, 474, 478 |
| 3D-footprint Homologues: | 2gzk_A, 1qrv_A, 4s2q_D, 1j5n_A, 3f27_D, 4y60_C, 1o4x_B, 3tmm_A, 7m5w_A, 3u2b_C, 1hry_A, 1ckt_A |
| Binding Motifs: | UN0310.1 rsbAGGGGGCGsb |
| Binding Sites: | UN0310.1.1 UN0310.1.10 UN0310.1.11 UN0310.1.12 UN0310.1.13 UN0310.1.14 UN0310.1.15 UN0310.1.16 UN0310.1.17 UN0310.1.18 UN0310.1.19 UN0310.1.2 UN0310.1.20 UN0310.1.3 UN0310.1.4 UN0310.1.5 UN0310.1.6 UN0310.1.7 UN0310.1.8 UN0310.1.9 |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.