Transcription Factor
Accessions: | AtMYB47 (AthaMYB 1.0) |
Names: | AtMYB47, Myb domain protein 47, MYB transcription factor, Putative MYB47 transcription factor |
Organisms: | Arabidopsis thaliana |
Libraries: | AthaMYB 1.0 1 1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed] |
Uniprot: | Q9M9U2 |
Length: | 268 |
Pfam Domains: | 14-61 Myb-like DNA-binding domain 17-76 Myb-like DNA-binding domain 67-111 Myb-like DNA-binding domain 70-121 Myb-like DNA-binding domain |
Sequence: (in bold interface residues) | 1 MGRTTWFDVDGMKKGEWTAEEDQKLGAYINEHGVCDWRSLPKRAGLQRCGKSCRLRWLNY 60 61 LKPGIRRGKFTPQEEEEIIQLHAVLGNRWAAMAKKMQNRTDNDIKNHWNSCLKKRLSRKG 120 121 IDPMTHEPIIKHLTVNTTNADCGNSSTTTSPSTTESSPSSGSSRLLNKLAAGISSRQHSL 180 181 DRIKYILSNSIIESSDQAKEEEEKEEEEEERDSMMGQKIDGSEGEDIQIWGEEEVRRLME 240 241 IDAMDMYEMTSYDAVMYESSHILDHLF* |
Interface Residues: | 14, 45, 49, 50, 51, 52, 54, 55, 58, 59, 60, 101, 102, 105, 106, 109, 110, 111 |
3D-footprint Homologues: | 1vfc_A, 3osg_A, 7xur_A, 2kdz_A, 5eyb_B, 6kks_A, 1mse_C, 3zqc_A |
Binding Motifs: | AtMYB47_I wwmaGTTr AtMYB47_II rbTrGTTr |
Binding Sites: | AAAAGTTA ACAAGTTA AGGTTA AGTAGTTA AGTGGTTA ATTAGTTG GCTTGTTG GTCAGTTA GTTAGTTG TACTGTTG TAGTTA TGCGGTTG |
Publications: | Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed] |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.