Transcription Factor
| Accessions: | K7URZ7 (JASPAR 2024) |
| Names: | K7URZ7_MAIZE |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Uniprot: | K7URZ7 |
| Length: | 914 |
| Pfam Domains: | 134-235 B3 DNA binding domain 260-343 Auxin response factor 775-870 AUX/IAA family |
| Sequence: (in bold interface residues) | 1 MKLSPSASGGLQDQPASPEEAEEHKCLNSELWHACAGPLVSLPSVGSRVVYFPQGHGEQV 60 61 AASTNKEMEAQIPNYPSLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPQELKDPFLP 120 121 AELGTASNQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLH 180 181 GNDWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQT 240 241 VMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRIS 300 301 VGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSL 360 361 WEIEPLTTFPMYPSPFALGLKRPWPAGLPSLYGGRGDGLTSSLMWLRDRANPGFQSLNFS 420 421 GLGMSPWMQPRLDNSLLGLQSDMYQTIAAAAALQSTTKQVPPSAMQFQQPQNIADRSALL 480 481 SSQILQQVQPRFQQIYPQNLNENKIQGHTQPEYLQVQQQLQRCQSFNEQKPPMHPQQQQQ 540 541 EPQQQQCVQTPQDQQMQEQKHLHNFHSLPDALSAFSQLSPATHSPPSALQTVPAFSHQQN 600 601 FPDTNISSLSPSTGPSMHGMLGRLPSEAASSLPCVAMNAPVSVSDPWSSKRVAVESVNPC 660 661 RPHVSPHIEHLDMATCNMPQSSALAPLPGRECLVDEDGCSDPQNHLLFGVHIDSHSLLMQ 720 721 GGIPALQNDNSSGTIPYSTSNFLSPSENDFPLNQPLRSAGCLDESDYLPCAENAEQANQQ 780 781 FATFVKVYKSGTVGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDD 840 841 VLLVGDDPWQEFVNSVSCIKILSPEEVQRMGKPGIQLLSSAPSRRLGNGCDSYASMQEPR 900 901 GLDAGMAPVGSVEF |
| Interface Residues: | 139, 141, 146, 147, 148, 150, 189, 191, 192, 193, 194, 195, 196, 197 |
| 3D-footprint Homologues: | 6j9b_A, 6sdg_B, 6ycq_A, 6fas_B, 7et6_A |
| Binding Motifs: | MA1688.1 racAAGACAAGAma MA1688.2 cAAGACAAGA |
| Binding Sites: | MA1688.1.1 MA1688.1.10 MA1688.1.11 MA1688.1.12 / MA1688.1.13 / MA1688.1.4 / MA1688.1.5 MA1688.1.14 / MA1688.1.6 MA1688.1.15 MA1688.1.16 / MA1688.1.7 MA1688.1.17 / MA1688.1.8 MA1688.1.18 MA1688.1.19 / MA1688.1.9 MA1688.1.2 MA1688.1.20 MA1688.1.1 / MA1688.1.3 MA1688.1.4 MA1688.1.2 / MA1688.1.5 MA1688.1.6 MA1688.1.7 MA1688.1.8 MA1688.1.3 / MA1688.1.9 MA1688.1.10 MA1688.1.11 MA1688.1.12 MA1688.1.13 MA1688.1.14 MA1688.1.15 MA1688.1.16 MA1688.1.17 MA1688.1.18 MA1688.1.19 MA1688.1.20 MA1688.2.1 MA1688.2.10 MA1688.2.11 MA1688.2.12 MA1688.2.13 MA1688.2.14 MA1688.2.15 MA1688.2.16 MA1688.2.17 MA1688.2.18 MA1688.2.19 MA1688.2.2 MA1688.2.20 MA1688.2.3 MA1688.2.4 / MA1688.2.5 MA1688.2.6 MA1688.2.7 MA1688.2.8 MA1688.2.9 |
| Publications: | Boer D.R, Freire-Rios A, van den Berg W.A, Saaki T, Manfield I.W, Kepinski S, López-Vidrieo I, Franco-Zorrilla J.M, de Vries S.C, Solano R, Weijers D, Coll M. Structural basis for DNA binding specificity by the auxin-dependent ARF transcription factors. Cell 156:577-89 (2014). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.