Transcription Factor

						

			
Accessions: T161744_1.02 (CISBP 1.02)

			
Names: NCU02307, T161744_1.02;
Organisms: Neurospora crassa
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:PBM, family:Zinc cluster
Length: 743
Pfam Domains:   208-244 Fungal Zn(2)-Cys(6) binuclear cluster domain
  284-733 Fungal specific transcription factor domain
Sequence: 
(in bold interface residues)		   1 MDSSLPAASDDGDLAWSDSHSMDSDDIQGLPQSSSWFTSLSSTSTSASMSSAMSFAQTGQ   60
  61 LSPISNGMDASYHGTDLSGNSCCSSSSASASASPELTQSAASLSSMENWEMALDSHHGSS  120
 121 GHGHGHHYELSWDPDSDDNMLPLPKMEPLDDDDFCMDHIKEAPANALPNSDGSMLDQPKA  180
 181 KRPRGRPRKHPIAPPVPANKITKGRSKTGCLTCRKRKKKCDEAKPRCMNCEKNAVVCEGY  240
 241 PEKQIWKSGRERAEEERLKSHSLPSITMQPLFHGLETVEDRIFWKHYNEHLSTVLTVEGE  300
 301 HKNAFKDMMVPIAVKHQGLMHSILSLASKHIDYDTPYGLNILKNNRSTSVHKLHERSLYH  360
 361 HDQARQKFYEDVEVSDAMNPQDKLRVSARYGQMLCFLLEALAEGNPRGEHRLHLSAYKSL  420
 421 ISSSPPEDSAFFSFIAEFFQYHIFADELIHSVSTLHHRAVPNDANYTPAIYPPRLIGVAD  480
 481 GLLEYLPQITMIRNTIRHNIVTQVDPVVDYVSLYRAAEIDAAIKDWTPHWPQGDHRDRVG  540
 541 LLYKHMMWIYLVRTVYPPSPSAPLPPTKSSDLRLSTLSHAYHSRIAAPGVTTPPMSASPS  600
 601 CTSSPKLEGSDYGMGSVPLLSTTSSLRAESPPPSRKPLQHDPRVTVAVEESLGIMESFKP  660
 661 SDPCQTLLLLPCFIIGTACFTPTHRDRVRAAVKTVKGYTGLRNADRALEVLEHVWQLMES  720
 721 GDWAAVWDWPRIAQGLGLDFIPA
Interface Residues: 203, 204, 205, 214, 216, 217, 218, 219, 243, 244, 245
3D-footprint Homologues: 1f5e_P, 6o19_A, 2er8_C, 1hwt_C, 1pyi_A, 7uik_T, 3coq_A, 6gys_C, 1d66_B, 1zme_D
Binding Motifs: M1726_1.02 tTwaSCGCGs
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.