Transcription Factor
| Accessions: | ZNF713_full (HumanTF 1.0) |
| Names: | ZN713_HUMAN, ZNF713 |
| Organisms: | Homo sapiens |
| Libraries: | HumanTF 1.0 1 1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
| Uniprot: | Q8N859 |
| Notes: | Ensembl ID: ENSG00000178665; Full protein sequence; TF family: znfC2H2; Clone source: Megaman |
| Length: | 431 |
| Pfam Domains: | 19-59 KRAB box 268-283 Zinc-finger double domain 272-293 C2H2-type zinc finger 273-295 Zinc finger, C2H2 type 273-295 C2H2-type zinc finger 288-311 Zinc-finger double domain 301-323 Zinc finger, C2H2 type 301-321 C2H2-type zinc finger 301-323 C2H2-type zinc finger 316-340 Zinc-finger double domain 328-351 C2H2-type zinc finger 329-351 Zinc finger, C2H2 type 329-349 C2H2-type zinc finger 343-367 Zinc-finger double domain 356-379 C2H2-type zinc finger 357-379 Zinc finger, C2H2 type 357-379 C2H2-type zinc finger 371-395 Zinc-finger double domain 384-405 C2H2-type zinc finger 385-407 Zinc finger, C2H2 type 385-407 C2H2-type zinc finger |
| Sequence: (in bold interface residues) | 1 MEEEEMNDGSQMVRSQESLTFQDVAVDFTREEWDQLYPAQKNLYRDVMLENYRNLVALGY 60 61 QLCKPEVIAQLELEEEWVIERDSLLDTHPDGENRPEIKKSTTSQNISDENQTHEMIMERL 120 121 AGDSFWYSILGGLWDFDYHPEFNQENHKRYLGQVTLTHKKITQERSLECNKFAENCNLNS 180 181 NLMQQRIPSIKIPLNSDTQGNSIKHNSDLIYYQGNYVRETPYEYSECGKIFNQHILLTDH 240 241 IHTAEKPSECGKAFSHTSSLSQPQMLLTGEKPYKCDECGKRFSQRIHLIQHQRIHTGEKP 300 301 FICNGCGKAFRQHSSFTQHLRIHTGEKPYKCNQCGKAFSRITSLTEHHRLHTGEKPYECG 360 361 FCGKAFSQRTHLNQHERTHTGEKPYKCNECGKAFSQSAHLNQHRKIHTREKLCEYKCEQT 420 421 VRHSPSFSST* |
| Interface Residues: | 198, 201, 204, 205, 207, 208, 211, 214, 233, 234, 235, 236, 239, 256, 258, 259, 262, 283, 284, 286, 287, 290, 294, 301, 312, 313, 314, 315, 317, 318, 320, 321, 322, 324, 339, 340, 341, 342, 343, 344, 345, 346, 367, 368, 369, 370, 371, 373, 374, 375, 395, 396, 397, 398, 399, 400, 401, 402, 403 |
| 3D-footprint Homologues: | 8ssq_A, 8ssu_A, 5v3j_F, 5yel_A, 1tf6_A, 7w1m_H, 6jnm_A, 5kkq_D, 5ei9_F, 5kl3_A, 6a57_A, 2kmk_A, 5k5i_A, 6ml4_A, 6blw_A, 2gli_A, 7txc_E, 7ysf_A, 6e94_A, 2jpa_A, 1ubd_C, 1tf3_A, 7y3l_A, 7n5w_A, 2drp_D, 5k5l_F, 6u9q_A, 4x9j_A, 1f2i_J, 8gn3_A, 1g2f_F, 8h9h_G, 2lt7_A, 8cuc_F, 3uk3_C, 1llm_D, 2wbs_A, 4m9v_C, 7y3m_I, 5yj3_D |
| Binding Motifs: | ZNF713_full WAGAArAAWGCCACGAA |
| Publications: | Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed] |
| Related annotations: | PaperBLAST |
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