Transcription Factor
| Accessions: | STA5A_MOUSE (HOCOMOCO 10), P42230 (JASPAR 2024) |
| Names: | Mammary gland factor, Signal transducer and activator of transcription 5A, STA5A_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1, JASPAR 2024 2 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] 2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 793 |
| Pfam Domains: | 2-125 STAT protein, protein interaction domain 138-330 STAT protein, all-alpha domain 332-583 STAT protein, DNA binding domain 595-669 SH2 domain |
| Sequence: (in bold interface residues) | 1 MAGWIQAQQLQGDALRQMQVLYGQHFPIEVRHYLAQWIESQPWDAIDLDNPQDRGQATQL 60 61 LEGLVQELQKKAEHQVGEDGFLLKIKLGHYATQLQNTYDRCPMELVRCIRHILYNEQRLV 120 121 REANNCSSPAGVLVDAMSQKHLQINQRFEELRLITQDTENELKKLQQTQEYFIIQYQESL 180 181 RIQAQFAQLGQLNPQERMSRETALQQKQVSLETWLQREAQTLQQYRVELAEKHQKTLQLL 240 241 RKQQTIILDDELIQWKRRQQLAGNGGPPEGSLDVLQSWCEKLAEIIWQNRQQIRRAEHLC 300 301 QQLPIPGPVEEMLAEVNATITDIISALVTSTFIIEKQPPQVLKTQTKFAATVRLLVGGKL 360 361 NVHMNPPQVKATIISEQQAKSLLKNENTRNECSGEILNNCCVMEYHQATGTLSAHFRNMS 420 421 LKRIKRADRRGAESVTEEKFTVLFESQFSVGSNELVFQVKTLSLPVVVIVHGSQDHNATA 480 481 TVLWDNAFAEPGRVPFAVPDKVLWPQLCEALNMKFKAEVQSNRGLTKENLVFLAQKLFNI 540 541 SSNHLEDYNSMSVSWSQFNRENLPGWNYTFWQWFDGVMEVLKKHHKPHWNDGAILGFVNK 600 601 QQAHDLLINKPDGTFLLRFSDSEIGGITIAWKFDSPDRNLWNLKPFTTRDFSIRSLADRL 660 661 GDLNYLIYVFPDRPKDEVFAKYYTPVLAKAVDGYVKPQIKQVVPEFVNASTDAGASATYM 720 721 DQAPSPVVCPQPHYNMYPPNPDPVLDQDGEFDLDESMDVARHVEELLRRPMDSLDARLSP 780 781 PAGLFTSARSSLS |
| Interface Residues: | 343, 430, 433, 470, 471, 472, 473, 474 |
| 3D-footprint Homologues: | 1bf5_A, 4y5w_B, 1bg1_A |
| Binding Motifs: | STA5A_MOUSE.H10MO.A|M01363 wtTTCykrGAAaw MA1624.1 wTTCCAAGAAah MA1624.2 TTCCAAGAA |
| Binding Sites: | MA1624.2.11 / MA1624.2.13 / MA1624.2.14 / MA1624.2.5 MA1624.2.10 / MA1624.2.17 / MA1624.2.18 / MA1624.2.20 / MA1624.2.9 MA1624.1.1 MA1624.1.10 MA1624.1.11 / MA1624.1.9 MA1624.1.12 MA1624.1.10 / MA1624.1.13 MA1624.1.14 MA1624.1.15 MA1624.1.16 MA1624.1.17 MA1624.1.18 MA1624.1.19 MA1624.1.2 MA1624.1.11 / MA1624.1.20 MA1624.1.3 MA1624.1.4 / MA1624.1.5 MA1624.1.5 MA1624.1.6 MA1624.1.7 MA1624.1.8 MA1624.1.8 / MA1624.1.9 MA1624.1.12 MA1624.1.13 MA1624.1.14 MA1624.1.15 MA1624.1.16 MA1624.1.17 MA1624.1.18 MA1624.1.19 MA1624.1.20 MA1624.1.3 MA1624.1.4 MA1624.1.7 MA1624.2.1 MA1624.2.12 MA1624.2.15 / MA1624.2.6 MA1624.2.16 MA1624.2.19 / MA1624.2.2 MA1624.2.3 MA1624.2.4 MA1624.2.7 MA1624.2.8 |
| Publications: | Soldaini E., John S., Moro S., Bollenbacher J., Schindler U., Leonard W. J. DNA binding site selection of dimeric and tetrameric Stat5 proteins reveals a large repertoire of divergent tetrameric Stat5a binding sites.. Mol. Cell. Biol. 20:389-401 (2000). [Pubmed] |
| Related annotations: | PaperBLAST |
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