Transcription Factor
| Accessions: | T161732_1.02 (CISBP 1.02) |
| Names: | NCU00445, T161732_1.02; |
| Organisms: | Neurospora crassa |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Zinc cluster |
| Length: | 1115 |
| Pfam Domains: | 107-151 Fungal Zn(2)-Cys(6) binuclear cluster domain |
| Sequence: (in bold interface residues) | 1 MAQYAGSAAQQAAAGHQSLSPLSPSASVSASVGTAPPLTPSGTAPAGTAAAAGPAPSAAT 60 61 AQSGAGSSSASQPQDKPRSQSQSGAGPSAAGGGASSTTGAQHKRVYQACIPCRRRKVRCD 120 121 LGSVDNPSDPPCVRCRRESKECYFSATRRKRKVDDDMTDIFDDPDHDDYILRNGRKQLRS 180 181 GESPVMAAPLDRRLYSDVPLTPGGSRGRAQPLRRPGDGGPNSTTSTGGARSTTGGEFGAG 240 241 EANTPLENLEARTVMRREVYGPHDALDLLYKAATDKLVDTRSDRSQRLPYADVARLRSPM 300 301 HRQDGESTAAGDSSRTNHHAGRPGLNSRHSSHHNDRPGYHSRHASRQEASTESIDPELTK 360 361 RDISQEPGYNEALKAWARFRFVRAGWFTAQEAIDYIEYYYAYLSPLTPISPPTFRNPASH 420 421 LTLLTEEPILTVTLLTIASRYRRMPGTGGHCRSHAIHEQLWTYLRGMIERVVWGQEAFGG 480 481 GFCGSGADESQSSSTAPWRGLRRGSLRTFGTIESLMILTEWHPRALHFPPSEAIDELLLP 540 541 SYEHNSADDDNNQKPSAGIGGRRIESWLEPAWRSDRMCWMLLSTALGLAYELGVFDEIDE 600 601 LLATGSITRPEYEDESYRLRAHRIKRLLLIYLSQLAGRLNWTNMVPENMRNDPIMSRRRP 660 661 HSGEGTTPGTNPSSTSNGFVYIPDLELDDQIILCWAGVSNVMHRGNEKLFRSRNYTTDII 720 721 QSGKYIQLLKEFQPLLRNWWNDFNRFVLPPYIRHILTIEYEYVRIYVNSLALQAVVERCT 780 781 NNPNVGGGGSTNGGSVSGHSAPQLSPQTQNYLGKLPLSQLGGFGAEDEEYVKEVVNGSRN 840 841 LLRTVVDGLLPKGYLKHAPVRTYFRIISGAMFLLKTFALGAPKSDVELSISLMDQTVDAL 900 901 RHCVVDDVHLGIRFADMLETLTSRLRNRFIHAPPPPVATTDGRSPNPNHQADTTNGNGPM 960 961 PHGAPNLSSGDVWSKLSANNLERGNPTNNISATPWDVAAGDFPYPTGSASMFGPSTPAAT 1020 1021 SNLPDTNGNSNGNGGGGGGGGGGLTDSMFENTDWANPSNEMWYLPTGPAFFQNIDNTSVS 1080 1081 MTAEGVNVGGVDLLDFMAMDPMDGASFVLDGGRYP |
| Interface Residues: | 102, 103, 104, 108, 113, 115, 116, 117, 118, 137, 138, 149, 150 |
| 3D-footprint Homologues: | 2hap_D, 1f5e_P, 2er8_C, 1pyi_A, 1zme_D, 7uik_T, 1d66_B, 3coq_A |
| Binding Motifs: | M1718_1.02 wwwwgCCGar |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.