Transcription Factor
| Accessions: | T071194_1.02 (CISBP 1.02) |
| Names: | danr, T071194_1.02; |
| Organisms: | Drosophila melanogaster |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:CENPB |
| Length: | 419 |
| Pfam Domains: | 18-69 CENP-B N-terminal DNA-binding domain |
| Sequence: (in bold interface residues) | 1 MDISAYQHMNIRMSTRGKRPLRNLTPNDKVRAIQRIHNGETKASVSRDIGVPESTLRGWC 60 61 KNEQKLRFMCRQLGPDHLGLDTPPEKRAKFELQLQLPPKFVALPPNYEELGFGALPYSPA 120 121 DYPVQNESLLEKLSLVEFVKKNGGLHPEGALHPGQAGVMDYSNNMLHQLNLLALLNSKLT 180 181 PQTADVLVDAQPKSEDNKVIDSPAASEDYSKNNYPLLSVKNWAKDPAKRVNSANQPEQVN 240 241 DKNNNALEANSSAPQALVTEQAKTPMFSDTTMPLLPAPFPNPADLAPVIAPVTPANAPPT 300 301 GTDNQGAALLDWCKLFNASLNFLAFAAAAASMQPGGGGPGGPSYNPNQMASGGSEPDLET 360 361 YPFNEALLKRLSPLAHSEASNESYCDSEPEDLSVRSCASKASSRSHTPDKSVGSSDAEQ |
| Interface Residues: | 43, 53, 54, 57, 58, 61, 62 |
| 3D-footprint Homologues: | 4z5h_A, 9b8u_A |
| Binding Motifs: | M0576_1.02 yCGCgrwww |
| Related annotations: | PaperBLAST |
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