Transcription Factor

Accessions: Q24478 (JASPAR 2024)
Names: Centrosome-associated zinc finger protein CP190, CP190_DROME, dMAP190, Protein enhancer of mod(mdg4
Organisms: Drosophila melanogaster
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Uniprot: Q24478
Length: 1096
Pfam Domains: 20-122 BTB/POZ domain
540-561 C2H2-type zinc finger
568-590 C2H2-type zinc finger
Sequence:
(in bold interface residues)
1 MGEVKSVKVDNWGVFFLQKLQNFFNKTDYCDLTLQFRDNSQLKVHRLVLSACTDYFNVLE 60
61 QTCEIVDDALIMPNEFQADVVVPIVNFMYTGTLEFELKMYGKLLRTAKEMNMTVLLKLLE 120
121 AHRRTMENVNRQQRPPSPKGIRRRTVGQPSSGLPQQRVLGPSPQSRNVATPIAQRANTQR 180
181 GSTGNTMSRTSGGSNRSPYGDSSNVKQEPTSPFEQLRKGYNNNKRPAQTSLLSPPSKKPS 240
241 LEEVKEFAEQQRMRKQIAAEYGDNDPEYDGGMLYDDVHAGDDDDDDMPPQPSTSKQQSPQ 300
301 GTQTQLEHGSTTIILKQDSPSQTPTIIVKDSSNAKLNHTKIIAEVLRQYPHIVKGHKNIK 360
361 LKIMPNTPAAPTEKSAPATVKPPANQSSATTSPHKKLHVSFKADKSTPLITAQQKAASSQ 420
421 QKSGTSQTTGNQGTGANPPANTAAAQKRRIDSKTMHALIAQGAENTTGPWLCLRCGVNGR 480
481 PISIPSYRGFRRHLINTHKETIDPALCEHCGWRSVNNRELHFHMYMEHQTKSLLYTFAEC 540
541 ALCNQSYRTKGELEAHINEVHTDDNKQQCIYCNKVFEQELQLYRHMKSYHKEQALEDGII 600
601 DETDEEFLGSQDEEEEAEGDEEQEPEQTGKVRILSDISLPATSAITVQQAQQEQLQEEDV 660
661 EQVQQEVKFVGADGNEVELTDEQRKEILSQLNQQQAGATAGGVVMVLSEPEAEHVKQETD 720
721 EKSLAGTEEEYDDSQIYSELGAADSVESAKKNIADESKESIDNLEWAENLIAESEEQSNK 780
781 EPKSDKPRDDISEKLKELTGDWTEDENDDDVDDKPATAELASELANKDPEPTVHEEEDDI 840
841 DLALQSLHKGPEEATEEKASEESVTSADDAVDAVPNINSQPEKMDVDSEAADEKASKAEV 900
901 QIKKEAELENDQEEFIKEDSPIPHSDSVAELREAVTASEGEDDVHLEADNIRKELLDELI 960
961 AEAEKPDQEKDIVQSEENATTEALDRSVTDEDDLVPPTQVSTEQMEIDEPAAEKAAENNE 1020
1021 DTRTADEKEAVEDKPNQTQDVTTAEKPTLESAKAGDEATSGEAASVDKVKSLISEWGDDD 1080
1081 EDEDENGVSAAAKEEL
Interface Residues: 480, 481, 483, 484, 487, 488, 489, 492, 493, 496, 515, 516, 517, 518, 519, 521, 522, 524, 526, 546, 547, 548, 549, 550, 551, 552, 555, 556, 577, 578, 579, 580, 581, 582, 583, 584, 585
3D-footprint Homologues: 7w1m_H, 5k5i_A, 5kkq_D, 8ssu_A, 8ssq_A, 7ysf_A, 5ei9_F, 7y3l_A, 8cuc_F, 6u9q_A, 5yel_A, 2lt7_A, 7n5w_A, 3uk3_C, 2kmk_A, 1f2i_J, 5k5l_F, 4x9j_A, 1g2f_F, 2wbs_A, 6ml4_A, 1llm_D, 5v3j_F, 4m9v_C, 8h9h_G, 6e94_A, 7txc_E, 7y3m_I
Binding Motifs: UN0107.1 cgCCyaAAAGTATGCwAyr
Binding Sites: UN0107.1.1
UN0107.1.10
UN0107.1.11
UN0107.1.12
UN0107.1.13
UN0107.1.14
UN0107.1.15
UN0107.1.16
UN0107.1.17
UN0107.1.18
UN0107.1.19
UN0107.1.2
UN0107.1.20
UN0107.1.3
UN0107.1.4
UN0107.1.5
UN0107.1.6
UN0107.1.7
UN0107.1.8
UN0107.1.9
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.