Transcription Factor
Accessions: | T07405 (AthalianaCistrome v4_May2016) |
Names: | At2g48100, T07405; |
Organisms: | Arabidopsis thaliana |
Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
Notes: | ecotype:Col-0, experiment type: DAP-seq, family:C2H2 |
Length: | 344 |
Pfam Domains: | 134-290 Exonuclease |
Sequence: (in bold interface residues) | 1 MDSQLNPSKRRKISVRHRCVACYKMFNRREHLVEHMKISYHSLHQPRCGVCLKHCKSFES 60 61 VREHLNVPDHLSKGNCKAIFTKRGCTLCLQIFEEAFALAEHKNKCHLSPPRPLGTSTQRN 120 121 PSSSLAGSRLKAMALDCEMVGGGADGTIDQCASVCLVDDDENVIFSTHVQPLLPVTDYRH 180 181 EITGLTKEDLKDGMPLEHVRERVFSFLCGGQNDGAGRLLLVGHDLRHDMSCLKLEYPSHL 240 241 LRDTAKYVPLMKTNLVSQSLKYLTKSYLGYKIQCGKHEVYEDCVSAMRLYKRMRDQEHVC 300 301 SGKAEGNGLNSRKQSDLEKMNAEELYQKSTSEYRCWCLDRLSNP |
Interface Residues: | 28, 30, 31, 34, 57, 59, 60, 63, 93, 94, 97 |
3D-footprint Homologues: | 2drp_D, 7ysf_A |
Binding Motifs: | M0339 TCACCA |
Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.