Transcription Factor
| Accessions: | T04168 (AthalianaCistrome v4_May2016) |
| Names: | AT1G24250, T04168; |
| Organisms: | Arabidopsis thaliana |
| Libraries: | AthalianaCistrome v4_May2016 1 1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed] |
| Notes: | ecotype:Col-0, experiment type: DAP-seq, family:Orphan |
| Length: | 252 |
| Pfam Domains: | 32-77 Paired amphipathic helix repeat 136-181 Paired amphipathic helix repeat 201-245 Paired amphipathic helix repeat |
| Sequence: (in bold interface residues) | 1 MAGGSLSPASSLEDVKAYVNAVEVALQEMEPARFGMFVRLFRGFTAPRIGMPTFSARMQD 60 61 LLKDHPSLCLGLNVLLPPEYQLTIPPEASEEFHKVVGRSVPVPPKVVGRSLPRPEPTIDD 120 121 ATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFGFCVF 180 181 LSATTSFTTKLKARFQGDGSQVVDSVLQIMRMYGEGNKSKHDAYQEVVALVQGHDDLVME 240 241 LSQILTDPPTGV |
| Interface Residues: | 110 |
| 3D-footprint Homologues: | 7xq5_B |
| Binding Motifs: | M0719 tyyyAACtaCCAMCyAmh |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.