Transcription Factor
| Accessions: | T001931_1.02 (CISBP 1.02) |
| Names: | PF14_0079, T001931_1.02; |
| Organisms: | Plasmodium falciparum |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:AP2 |
| Length: | 1702 |
| Pfam Domains: | 1598-1656 AP2 domain |
| Sequence: (in bold interface residues) | 1 MYIKMMNTTGEIRNLCLNILNSVKKKCDEDIESNDDKKNLCENNSDIVEKMKGNYEYKDD 60 61 NNKDDNNKDDNNKDGTNKDDNNKDGTNKDDNNTDDNNKDGNNKDDNNINNNNNIDDNNIY 120 121 DNLMETKGDKKKYYKSKKNDHHQYKDINKLNKESSLNNKKEEKYNSTCAIINNKGKAISK 180 181 GNGKYPNELIKKEYNKKKNEKNKKSIDENKKQNDENKKQKCENKKKCGESKKKSEDNKKS 240 241 NTENKKDVKYNYYSRTNYFVPNEMNGNIFKNNYTHLENKNEFGNYIPTYISNDNKNMNRS 300 301 NRNENNLYLLNAGDEEKSSYVYNYEEKLNISCRFFIQESNPYELDIRMLKENCLTVFELL 360 361 YREKKKWCSLYISTMNGPMSNFNYHLFKILCSNDEIYMYFFLFKKFIFSCYIYFNLVSIQ 420 421 IYSNFSNIEESETSSYGFKNLINTNVQGTNNKIDYISADIHHHHNNNNNNMSSNSHSVSK 480 481 KKKKDITYDINEQGENKIEDDILKKKYNKYISPNFFSNSTNISSACINSYNMNNLNEEKS 540 541 YVSNTFTNNHNNLCDTTCDRRNNIYLKNMNNFSSTKDEDEKLLNFIYDPSKHLCGNRINY 600 601 CSSYFHFFDKNQEDIKKKLQLFINTHSPTMVNITEKWNNFYENKNKIYSFVEKYKDIKVS 660 661 SIDHFRKDTTEKFISTFIETFSYVNRVSWKDQNGVVEHNNCNDNDKEKEQNGPLKQDNND 720 721 NNKDNNKDSNNGNNNVNNNNDNNNDNNNNNDNNNDNNNNNDNNNDNNDKDEKKKKKKNQS 780 781 NYYQQHNICDDHKSLYDDVKKKDEEQNCNTQQDEKKEEKSDTLLENHDNQENIVKRTDEI 840 841 INEENDDYDKKKKKNFWNIFELIKNDTYNNDNNNDNNNNNNNNNNNNNNNNNNNNNNNNN 900 901 NDNNYVERKENSSISKILDEKNNLSNNDPIDKSVEKDIFTDQYKTNKNGSIIQESDNDNY 960 961 NTTRNEEIHEDEDEEDDDEKEDVEKEDVEKEDVEKEDVEKEDVEKEDVEKEDVEKEDVEK 1020 1021 EDVEKEDVEKEDNEEQKEHQIVESSEKKHKIILNNNTHNGDISHNDNNTLYNVGIGMFNN 1080 1081 NCSDNSNTKDSLSLMISHKSLTMDLNESMEDEKKEQSKDYNEDKNNNNNNNNDNLCSNSF 1140 1141 DNIHVKIKKEIVVNDDQNDDQNGDQNGDQNDDQNGDKKNMSGGNFQNDPSDKCNNDNPSF 1200 1201 NNKKNYFPNYIILNNLNILITDLNELYDYVENGIDKNLLRQKNIPIDYCLKGDESLPLGV 1260 1261 LPMEYEQNDKHHHHHHHHHHHHNVFVVEPTTCSNELCKRYNNLSNIKNKENEHGKCNSNC 1320 1321 VSRKCYTIHHNDKEMVEKNEENKKDECCNFDMMSTLDYQRFCRVCSGIEYENFERKIDYT 1380 1381 KDNNYKVPEVFINESDFFCNCNNMNVLTTNNPNYSFNNTKGSNVYDVDYNNKNFFNDKSY 1440 1441 NDNNNNYYINKFNDIHKMNEVIAQHCFYNDEYKTQVDDKKRKLGVHIDKRNNNNIIQNDD 1500 1501 MNNDYYNAYVTKAKTKFWGFDNNKSLETNKNAALNNRELRNSKKNKLLTKNNQSETNKTN 1560 1561 NKTTKSASTIEGKSPRVKKLEKFTNVDQEELREVFGPTGVSGVYFEKSRSSWTAQYKVSG 1620 1621 GKRRAKRFLVTKNMSYEEIENVKQQCIAYRKQMEREYIKEFLNEENKKKINNSENDPLNT 1680 1681 DVVSTGVKKVKRKRKLKNIYEG |
| Interface Residues: | 478, 480, 481, 482, 1625, 1627 |
| 3D-footprint Homologues: | 2gb7_A, 1nk2_P |
| Binding Motifs: | M0058_1.02 TGCmACCr |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.