Transcription Factor

						

			
Accessions: 4cyc_A (3D-footprint 20231221)

			
Names: HOMEOTIC PROTEIN ULTRABITHORAX, UBX_DROME
Organisms: Drosophila melanogaster
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Uniprot: P83949
Length: 66
Pfam Domains:      6-60 Homeobox domain
Sequence: 
(in bold interface residues)		   1 FYPWMARQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKK   60
  61 EIQAIK
Interface Residues: 5, 7, 45, 46, 48, 49, 52, 53, 56, 57, 60
3D-footprint Homologues: 1zq3_P, 1fjl_B, 6es3_K, 4xrs_G, 3d1n_M, 2hos_A, 1b72_A, 5zfz_A, 4cyc_A, 1ig7_A, 6m3d_C, 5flv_I, 2ld5_A, 5zjt_E, 3a01_E, 2h1k_B, 1jgg_B, 7psx_B, 5hod_A, 3lnq_A, 1puf_A, 6a8r_A, 3cmy_A, 2hdd_A, 7q3o_C, 5jlw_D, 3rkq_B, 7xrc_C, 2xsd_C, 4j19_B, 1e3o_C, 1le8_A, 1au7_A, 1puf_B, 1nk2_P, 3l1p_A, 1o4x_A, 8g87_X, 1du0_A, 2lkx_A, 4qtr_D, 2r5y_A
Binding Motifs: 4cyc_A ATAa
4cyc_AB gTGAatTA
Binding Sites: 4cyc_C
4cyc_D
			
Publications: Foos N, Maurel-Zaffran C, Maté M.J, Vincentelli R, Hainaut M, Berenger H, Pradel J, Saurin A.J, Ortiz-Lombardía M, Graba Y. A flexible extension of the Drosophila ultrabithorax homeodomain defines a novel Hox/PBC interaction mode. Structure (London, England : 1993) 23:270-9 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.