Transcription Factor

						

			
Accessions: T27115 (AthalianaCistrome v4_May2016)

			
Names: AT5G25475, T27115;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Notes: ecotype:Col-0, experiment type: DAP-seq, family:ABI3-VP1
Length: 324
Pfam Domains:    78-155 B3 DNA binding domain
Sequence: 
(in bold interface residues)		   1 MLPKNAIEKIQANVSKPCFWKSLSPGQTWKSKSMLPLWVLLRRRFRLPLAHKVITFSLMF   60
  61 PLLNVSIVLLISGFIKRIIPEDFVRRTRGAFEHRVVFSVRWENSWQLWLEREKNELFMIE  120
 121 EDWNEFVDDNHLGPNDNLFIKHDETMNLEVQIFKNNGVEIIDVPLGVEPETEPFHPTPKK  180
 181 PHKETTPASSFASGSGCSANGGTNGRGKQRSSDVKNPERYLLNPENPYFVQAVTKRNDVL  240
 241 YVSRPVVQSYRLKFGPVKSTITYLLPGEKKEEGENRIYNGKPCFSGWSVLCRRHNLNIGD  300
 301 SVVCELERSGGVVTAVRVHFVKKD
Interface Residues: 108, 111, 116, 279, 282
3D-footprint Homologues: 6j9c_D, 8oj2_A
Binding Motifs: M0007 CAAGCA
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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