Transcription Factor
| Accessions: | T090011_1.02 (CISBP 1.02) |
| Names: | Dux, T090011_1.02; |
| Organisms: | Mus musculus |
| Libraries: | CISBP 1.02 1 1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed] |
| Notes: | experiment type:PBM, family:Homeodomain |
| Length: | 674 |
| Pfam Domains: | 19-72 Homeobox domain 113-168 Homeobox domain |
| Sequence: (in bold interface residues) | 1 MAEAGSPVGGSGVARESRRRRKTVWQAWQEQALLSTFKKKRYLSFKERKELAKRMGVSDC 60 61 RIRVWFQNRRNRSGEEGHASKRSIRGSRRLASPQLQEELGSRPQGRGMRSSGRRPRTRLT 120 121 SLQLRILGQAFERNPRPGFATREELARDTGLPEDTIHIWFQNRRARRRHRRGRPTAQDQD 180 181 LLASQGSDGAPAGPEGREREGAQENLLPQEEAGSTGMDTSSPSDLPSFCGESQPFQVAQP 240 241 RGAGQKEDPTRAGNAGSLEPLLDQLLDEVQVEEPAPAPLNLDGDPGGRVHEGSQESFWPQ 300 301 EEAGSTGMDTSSPSDSNSFCRESQPSQVAQPCGAGQEDARTQADSTGPLELLLLDQLLDE 360 361 VQKEEHVPVPLDWGRNPGSREHEGSQDSLLPLEEAVNSGMDTSIPSIWPTFCRESQPPQV 420 421 AQPSGPGQAQAPTQGGNTDPLELFLYQLLDEVQVEEHAPAPLNWDVDPGGRVHEGSWESF 480 481 WPQEEAGSTGLDTSSPSDSNSFFRESKPSQVAQRRGAGQEDARTQADSTGPLELLLFDQL 540 541 LDEVQKEEHVPAPLDWGRNPGSMEHEGSQDSLLPLEEAANSGRDTSIPSIWPAFCRKSQP 600 601 PQVAQPSGPGQAQAPIQGGNTDPLELFLDQLLTEVQLEEQGPAPVNVEETWEQMDTTPDL 660 661 PLTSEEYQTLLDML |
| Interface Residues: | 19, 20, 21, 22, 60, 63, 64, 67, 68, 71, 72, 106, 113, 114, 115, 116, 154, 155, 157, 158, 161, 162, 164, 165, 166, 167, 168, 169 |
| 3D-footprint Homologues: | 1puf_A, 8pmf_A, 5zfz_A, 1zq3_P, 1nk2_P, 6es3_K, 7q3o_C, 8eml_B, 4xrs_G, 2hdd_A, 4cyc_A, 2r5y_A, 2hos_A, 1au7_A, 5jlw_D, 1le8_A, 3rkq_B, 1du0_A, 5flv_I, 4qtr_D, 3a01_E, 3cmy_A, 3d1n_M, 5zjt_E, 1fjl_B, 8ejp_B, 6a8r_A, 1ig7_A, 2lkx_A, 1jgg_B, 6m3d_C, 3lnq_A, 2ld5_A, 1puf_B, 9b8u_A, 8ik5_C, 7psx_B, 5hod_A, 1b72_A, 2d5v_B, 8osb_E, 7xrc_C, 1e3o_C, 2xsd_C, 8g87_X, 8bx1_A, 4xrm_B |
| Binding Motifs: | M0836_1.02 sCAATCAa |
| Related annotations: | PaperBLAST |
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