Transcription Factor

						

			
Accessions: AtMYB50 (AthaMYB 1.0)

			
Names: At1g57560, AtMYB50, DNA-binding protein, putative, Myb domain protein 50, MYB transcription factor
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9C695
Length: 315
Pfam Domains:     14-61 Myb-like DNA-binding domain
    17-75 Myb-like DNA-binding domain
   67-110 Myb-like DNA-binding domain
   70-116 Myb-like DNA-binding domain
Sequence: 
(in bold interface residues)		   1 MKRHSCCYKQKLRKGLWSPEEDEKLLNYITKHGHGCWSSVPKLAGLERCGKSCRLRWINY   60
  61 LRPDLKRGAFSSEEQNLIVELHAVLGNRWSQIAARLPGRTDNEIKNLWNSCIKKKLMKKG  120
 121 IDPITHKPLSEVGKETNRSDNNNSTSFSSETNQDLFVKKTSDFAEYSAFQKEESNSVSLR  180
 181 NSLSSMIPTQFNIDDGSVSNAGFDTQVCVKPSIILLPPPNNTSSTVSGQDHVNVSEPNWE  240
 241 SNSGTTSHLNNPGMEEMKWSEEYLNESLFSTQVYVKSETDFNSNIAFPWSQSQACDVFPK  300
 301 DLQRMAFSFGGQTL*
Interface Residues: 14, 49, 50, 51, 52, 54, 55, 58, 59, 60, 101, 102, 105, 106, 109, 110, 111
3D-footprint Homologues: 3osg_A, 2kdz_A, 7xur_A, 5eyb_B, 6kks_A, 3zqc_A, 1mse_C
Binding Motifs: AtMYB50_I awmAGTTr
AtMYB50_II GkTwGkTr
Binding Sites: GTTAGTTA
AAAAGTTA
ACAAGTTA
AGGTTA
ATTAGTTG
GCTTGTTG
GGTAGGTG
GGTTGGTG
GTCAGTTA
GTTAGTTG
TACTGTTG
			
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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