Transcription Factor
| Accessions: | TFEB_MOUSE (HOCOMOCO 10) |
| Names: | TFEB_MOUSE |
| Organisms: | Mus musculus |
| Libraries: | HOCOMOCO 10 1 1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed] |
| Uniprot: | Q9R210 |
| Length: | 475 |
| Pfam Domains: | 235-288 Helix-loop-helix DNA-binding domain 320-473 Domain of unknown function (DUF3371) |
| Sequence: (in bold interface residues) | 1 MASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQLGGPPTPAINTPVHFQS 60 61 PPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHVSPAQGSPKPAPAA 120 121 SPGVRAGHVLSTSAGNSAPNSPMAMLHISSNPEKEFDDVIDNIMRLDSVLGYINPEMQMP 180 181 NTLPLSSSHLNVYSGDPQVTASMVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHN 240 241 LIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENH 300 301 SRRLEMTNKQLWLRIQELEMQARVHGLPTTSPSGVNMAELAQQVVKQELPSEDGPGEALM 360 361 LGPEVPEPEQMPALPPQAPLPSAAQPQSPFHHLDFSHGLSFGGGGDEGPTGYPDTLGTEH 420 421 GSPFPNLSKKDLDLMLLDDSLLPLASDPLFSTMSPEASKASSRRSSFSMEEGDVL |
| Interface Residues: | 236, 238, 239, 240, 242, 243, 246, 247, 271, 273 |
| 3D-footprint Homologues: | 1a0a_B, 1an4_A, 4zpk_A, 7ssa_L, 6g1l_A, 5eyo_A, 7xi3_A, 5nj8_D, 4h10_A, 7d8t_A, 5gnj_I, 1am9_A, 8osl_O, 5v0l_A, 4h10_B, 7f2f_B, 5i50_B, 2ypa_A, 8osl_P, 5nj8_C, 5v0l_B |
| Binding Motifs: | TFEB_MOUSE.H10MO.C|M01393 rRTCACGTG |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.