Transcription Factor

Accessions: AtMYB76 (AthaMYB 1.0)
Names: AtMYB76, HAG2, Myb-related protein 76, Protein HIGH ALIPHATIC GLUCOSINOLATE 2, Transcription factor MYB76
Organisms: Arabidopsis thaliana
Libraries: AthaMYB 1.0 1
1 Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Uniprot: Q9SPG5
Length: 339
Pfam Domains: 14-61 Myb-like DNA-binding domain
17-77 Myb-like DNA-binding domain
67-112 Myb-like DNA-binding domain
70-117 Myb-like DNA-binding domain
Sequence:
(in bold interface residues)
1 MSKRPYCIGEGLKKGAWTTEEDKKLISYIHDHGEGGWRDIPEKAGLKRCGKSCRLRWTNY 60
61 LKPDIKRGEFSYEEEQIIIMLHASRGNKWSVIARHLPKRTDNEVKNYWNTHLKKRLIDDG 120
121 IDPVTHKPLASSNPNPVEPMKFDFQKKSNQDEHSSQSSSTTPASLPLSSNLNSVKSKISS 180
181 GETQIESGHVSCKKRFGRSSSTSRLLNKVAARASSIGNILSTSIEGTLRSPASSSGLPDS 240
241 FSQSYEYMIDNKEDLGTSIDLNIPEYDFPQFLEQLINDDDENENIVGPEQDLLMSDFPST 300
301 FVDEDDILGDITSWSTYLLDHPNFMYESDQDSDEKNFL*
Interface Residues: 14, 49, 50, 51, 52, 53, 54, 55, 56, 58, 59, 60, 101, 102, 105, 106, 109, 110, 111, 257
3D-footprint Homologues: 3osg_A, 1vfc_A, 1w0t_A, 2kdz_A, 7xur_A, 5eyb_B, 1mse_C, 6kks_A, 3zqc_A, 3ted_A, 6g0l_M, 1dct_B
Binding Motifs: AtMYB76_I dwmwGTTr
AtMYB76_II rGTwGkTr
Binding Sites: AAAAGTTA
AGTAGTTA
GGTAGGTG
GGTTGGTG
GTCAGTTA
TACTGTTG
Publications: Kelemen Z., Sebastian A., Xu W., Grain D., Salsac F., Avon A., Berger N., Tran J., Dubrecq B., Lurin C., Lepiniec L., Contreras-Moreira B., Dubos C. Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast. PLoS One 10, e0141044 (2015). [Pubmed]
Related annotations: PaperBLAST

Disclaimer and license

These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.