Transcription Factor

						

			
Accessions: SlWRKY2 (EEADannot 2025-01-07)

			
Names: Q9ARC7;Solyc07g066220
Organisms: Solanum lycopersicum
Libraries: EEADannot 2025-01-07 1
1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed]
Notes: family:GCM domain factors WRKY
Length: 739
Pfam Domains:   323-380 WRKY DNA -binding domain
  534-592 WRKY DNA -binding domain
Sequence: 
(in bold interface residues)		   1 MGGFDDHVAIMGDWMPPSPSPRTFFSSLLGDDGGSRLSFDGTNETSGNLASGPQEHVGNS   60
  61 DGVDTAPAAISEPQPVKLSVPSDQKMNSRGGGLLERIAARAGFNAPKLNTESLRPADLRQ  120
 121 NQGVRSPYLTIPPGLSPTTLLESPVFLSNSLVQPSPTTGKFLFSSGIDNRNSALMMEDTD  180
 181 KRKDNALESINSSSFSFKPVPETAPSLFPGTTSRSWLQVNPSNFSQQGFPNIEVSVHSQN  240
 241 SLVSHRVEATQNPTQNGTLQQSSDFPRFSAEKDVMANNVTLDSRTFQTVGSAVDHSPPLD  300
 301 EPQDEDIDQRGGGDPNVAGAPAEDGYNWRKYGQKQVKGSEYPRSYYKCTHPTCPVKKKVE  360
 361 RSPEGHITEIIYKGAHNHPKPPPNRRSALGSTNSLGDLQVDGAEQGASGVNGDLGQANFH  420
 421 KAPGGGGGFDWRNNNRDANLGSEHCNRSAPFSAQNNTRLESGDAVDVSSNFSNDEDEDDR  480
 481 GTHGSVSQGYEGEGDESESKRRKLETYSADMTGATRAIREPRVVVQTTSEVDILDDGYRW  540
 541 RKYGQKVVKGNPNPRSYYKCTSAGCNVRKHVERASHDLKSVITTYEGKHNHDVPAARNSS  600
 601 HVNSGASNTHPASVTAPAQNHLHRPEAAQLQNAMARFDRQPSLGSFGLSGRPPQLGPNPG  660
 661 FSYGMNQQGGLSSLAMAGFHPNQNKPGEVPMHPYLGQPRPMHDMGFMFPKEEPKVEPLSD  720
 721 PGPTAYQQFLNSLSLGPQM
Interface Residues: 542, 543, 545, 546, 557
3D-footprint Homologues: 7z0u_A
Binding Motifs: EEAD0160 TTGAC
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.