Transcription Factor
| Accessions: | A0A1D6HQE4 (JASPAR 2024) |
| Names: | A0A1D6HQE4_MAIZE |
| Organisms: | Zea mays |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 152 |
| Pfam Domains: | 93-144 Basic region leucine zipper 96-145 bZIP transcription factor |
| Sequence: (in bold interface residues) | 1 MPRSPQLSLSGCSSLFSLSSTSTSRDSAALKAPVPAPPAGAVPPRRTPLLSLSVGEEEED 60 61 EGEDEEEYLLGAGALDLQLTGPGGGSNSSGGYDDERKNIRMMRNRESALRSRARKRAYVQ 120 121 ELEKEVRRLVNENLKLKRQCKQVTNSSTLCLL |
| Interface Residues: | 104, 105, 107, 108, 111, 112 |
| 3D-footprint Homologues: | 2dgc_A, 1dh3_C |
| Binding Motifs: | MA1822.1 yacGTACGTACry MA1822.2 GTACGTAC |
| Binding Sites: | MA1822.2.19 MA1822.2.3 / MA1822.2.4 MA1822.1.1 / MA1822.1.3 MA1822.1.10 MA1822.1.11 MA1822.1.12 MA1822.1.13 MA1822.1.14 MA1822.1.15 MA1822.1.16 MA1822.1.17 MA1822.1.18 MA1822.1.19 MA1822.1.2 / MA1822.1.4 MA1822.1.20 MA1822.1.3 / MA1822.1.5 MA1822.1.4 / MA1822.1.6 MA1822.1.11 / MA1822.1.5 MA1822.1.18 / MA1822.1.6 MA1822.1.19 / MA1822.1.7 MA1822.1.8 MA1822.1.9 MA1822.2.11 / MA1822.2.13 MA1822.1.1 MA1822.1.10 MA1822.1.12 MA1822.1.13 / MA1822.1.14 MA1822.1.15 MA1822.1.16 MA1822.1.17 MA1822.1.2 MA1822.1.20 MA1822.1.7 MA1822.1.8 MA1822.1.9 MA1822.2.1 / MA1822.2.14 MA1822.2.10 / MA1822.2.12 MA1822.2.15 / MA1822.2.2 MA1822.2.16 MA1822.2.17 MA1822.2.18 MA1822.2.20 MA1822.2.5 MA1822.2.6 MA1822.2.7 MA1822.2.8 MA1822.2.9 |
| Publications: | Izawa T., Foster R., Chua N.-H. Plant bZIP protein DNA binding specificity.. J. Mol. Biol. 230:1131-1144 (1993). [Pubmed] |
| Related annotations: | PaperBLAST |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.