Transcription Factor
| Accessions: | APETALA2a (EEADannot 2025-01-07) |
| Names: | AP2a, NP_001234452.1, Solyc03g044300.3.1 |
| Organisms: | Solanum lycopersicum |
| Libraries: | EEADannot 2025-01-07 1 1 Contreras-Moreira B, Sebastian A. FootprintDB: Analysis of Plant Cis-Regulatory Elements, Transcription Factors, and Binding Interfaces. Methods Mol Biol 1482:259-77 (2016) [Pubmed] |
| Notes: | family:AP2/EREBP AP2 |
| Length: | 401 |
| Pfam Domains: | 136-185 AP2 domain 228-278 AP2 domain |
| Sequence: (in bold interface residues) | 1 MWNLNDSPDQTMEYESDEGITVRSESNSISSALLVVEDGNSSEEDGEKGKKKKSNNTPGK 60 61 IFGFSIKDHNLESPVVTRQFFPVDNESTNFPRAQWAGIKFCESEPPLVNGLVGNKIDVLQ 120 121 QQPIKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAA 180 181 IKFRGAEADINFTSKDYEDDLKQMSNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGR 240 241 WEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKDAVTNFDRSIYENELNSTECT 300 301 DNATDHNLDLSLGGSSQEMGDNRGQNSSSNLQLDGHWGHQGSSRHNNKVQTPSSNNVGQI 360 361 GGTSNFQNNYEIIATAAASSGFPQQIIRTQNNGFHHYFMRP |
| Interface Residues: | 142, 144, 146, 151, 153, 155, 160, 162, 234, 236, 237, 242, 244, 253, 255 |
| 3D-footprint Homologues: | 7wq5_A |
| Binding Motifs: | EEAD0067 AACAAA |
| Related annotations: | PaperBLAST |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.