Transcription Factor

						

			
Accessions: T027158_1.02 (CISBP 1.02)

			
Names: Atf6, T027158_1.02;
Organisms: Drosophila melanogaster
Libraries: CISBP 1.02 1
1 Weirauch MT, Yang A, Albu M, Cote AG, Montenegro-Montero A, Drewe P, Najafabadi HS, Lambert SA, Mann I, Cook K, Zheng H, Goity A, van Bakel H, Lozano JC, Galli M, Lewsey MG, Huang E, Mukherjee T, Chen X, Reece-Hoyes JS, Govindarajan S, Shaulsky G, et al. Determination and inference of eukaryotic transcription factor sequence specificity. Cell. 2014 Sep 11;158(6):1431-43. doi: 10.1016/j.cell.2014.08.009. [Pubmed]
Notes: experiment type:B1H, family:bZIP
Length: 741
Pfam Domains:   285-337 bZIP transcription factor
  289-335 Basic region leucine zipper
Sequence: 
(in bold interface residues)		   1 MDINEYNLYNDLSLLGEVTENNYDNNIVHDILNSSAFYNDTSLDLSELIPDLQKEAFGLH   60
  61 FSSNPITSEFSLSSPISGLKQIPSACSGEFKRNVNDNNFQLDLTNSRNDLPEPNSSPTRS  120
 121 LNRSNVNGCSNEEAVYPLLVDSDKFDPFFEPAKVRSPNKEFNSTISNLSDIKNELPETSQ  180
 181 DLGFNSYNTSRNNSTLTKSWPINTELNLDNQVPKTVLPLSRTIYLPSHDYKGLLPTVKCN  240
 241 GDRTLKKNVNVRSKISNIVIKKKNATFIQSLKESTPSHTMDDKIYKKYQRMIKNRESASL  300
 301 SRKKRKEYVVSLETRINKLEKECDSLKAENITLRDQIFLLATSCQRESGNANGLLHNYSG  360
 361 SERSENKNGRFTSKAKHCNKNNTTATIKKNVAILFAMAFVVSLNAGNFQKYLNIPNNLEG  420
 421 KSEIEPVGKQLSMSNRRLLWADSEEEYKEKNNLSTFLSGKQKEPSLYFLNSGIRNHKINS  480
 481 FENITKNVSHTYSYNEPPPLTYLSTRNCINRCRSHNGSSNQSKYFMLAQNLHKWISGTLN  540
 541 VSNFSKEKEDSNGFEFFNNYFEEKRDIHIKHEKRKMFIDLNDYTSVLPEKQQKLNNTKSF  600
 601 ENMREQINVISKIERRDDTFYVFSFNMDHALLPALSYNSSYRPKLSLVLPLENPGINGKM  660
 661 KMIQVDCEVFNTKDFEVSHHLFPAKLRQNVIPRKPNKLNIKKSSTETPVSKTQRVRNFYK  720
 721 VGSRNQATVASSFNKETKFIN
Interface Residues: 290, 293, 294, 295, 297, 298, 301, 302
3D-footprint Homologues: 7x5e_E, 1gd2_G, 5t01_B, 5vpe_D, 1dh3_C
Binding Motifs: M4748_1.02 GcTGACGTGgmA
			
Related annotations: PaperBLAST

	
			


			

				

				
				
				
				

			

			

		

	
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