Transcription Factor
| Accessions: | 3ugo_A (3D-footprint 20231221) |
| Names: | RNA polymerase sigma factor, SIGA_THEAQ |
| Organisms: | Thermus aquaticus |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Uniprot: | Q9EZJ8 |
| Length: | 180 |
| Pfam Domains: | 2-37 Sigma-70 factor, region 1.2 111-180 Sigma-70 region 2 |
| Sequence: (in bold interface residues) | 1 TSDPVRQYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQELIREVVRAKIL 60 61 GTARIQKIPGLKEKPDPKTVEEVDGKLKSLPKELKRYLHIAREGEAARQHLIEANLRLVV 120 121 SIAKKYTGRGLSFLDLIQEGNQGLIRAVEKFEYKRRFKFSTYATWWIRQAINRAIADQAR 180 |
| Interface Residues: | 70, 78, 82, 84, 85, 89, 102, 105 |
| 3D-footprint Homologues: | 5zmd_G, 2irf_L, 4awl_A |
| Binding Motifs: | 3ugo_A gTAnAAT |
| Publications: | Feklistov A, Darst SA. Structural basis for promoter-10 element recognition by the bacterial RNA polymerase σ subunit. Cell 147:1257-69 (2011). [Pubmed] |
| Related annotations: | PaperBLAST |
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